Gene omics information

Query gene ID Contig4710_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4710_atContig4710--3e-1At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)S.X.H.G.
0.9198.1Contig4707_x_atContig4707--5e+0At2g35900unknown proteinS.X.H.G.
0.7388.7HVSMEn0024D12r2_atHVSMEn0024D12r2--5e-1At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinS.X.H.G.
0.6784.7Contig2632_s_atContig2632--4e+0At5g37550unknown proteinS.X.H.G.
0.5066.9Contig5376_atContig5376--3e+0At3g44950glycine-rich proteinS.X.H.G.
0.5066.9Contig8661_atContig8661--1e+0At3g48298unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
52.7100.0GSM16082319% SWC rep1GSE6990Barley drought stress
33.399.9GSM16082619% SWC rep3GSE6990Barley drought stress
31.499.9GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
20.799.7GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
20.799.7GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
18.499.7GSM372938genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.999.3GSM419974Lemma_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
11.999.3GSM440959Control lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
9.499.0GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.398.8GSM372939genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.680805Contig4711_s_atContig4711--6e+0At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)C.G.S.X.
0.032e+032HVSMEg0010K10r2_atHVSMEg0010K10r2--9e-1At5g52200unknown proteinC.G.S.X.
0.022e+032Contig3840_atContig3840--2e-3At5g20720CPN20 (CHAPERONIN 20)C.G.S.X.
0.032e+032HVSMEl0003E22r2_atHVSMEl0003E22r2--5e+0At5g60430antiporter/ drug transporterC.G.S.X.
0.032e+032Contig22918_atContig22918--3e-1At2g21140ATPRP2 (PROLINE-RICH PROTEIN 2)C.G.S.X.
0.032e+032Contig21047_atContig21047--1e+0At1g04500zinc finger CONSTANS-relatedC.G.S.X.
0.012e+032Contig5650_atContig5650--2e-7At2g36310URH1 (URIDINE-RIBOHYDROLASE 1)C.G.S.X.
0.021e+130Contig4715_atContig4715--1e+0At4g10810unknown proteinC.G.S.X.
0.021e+130Contig3535_atContig3535--2e-2At5g5729060S acidic ribosomal protein P3 (RPP3B)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-136Arabidopsis thalianaAt2g17560816263HMGB4 (HIGH MOBILITY GROUP B 4)Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.---C.G.S.X.
0.043e-240Glycine maxGmaAffx.14614.1.S1_atBM732578--8e-1At1g70040unknown proteinC.G.S.X.
0.027e-756Oryza sativaOs06g0708000AF194415.1-MAP kinase homolog1e-68At3g18040MPK9 (MAP KINASE 9)C.G.S.X.
0.032e+034Populus trichocarpaPtp.4101.1.S1_s_atBU837371--7e-8At1g78340ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)C.G.S.X.
0.373e-29129Triticum aestivumTa.29358.1.A1_atBJ321494--2e-6At3g18040MPK9 (MAP KINASE 9)C.G.S.X.
0.036e+030Vitis vinifera1618900_atCD802451--1e+0At1g35260MLP165 (MLP-LIKE PROTEIN 165)C.G.S.X.
0.035e-134Zea maysZm.9971.1.A1_atBM338027hypothetical protein LOC100192482-1e+0At1g33760AP2 domain-containing transcription factor, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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