Gene omics information

Query gene ID Contig4707_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4707_x_atContig4707--5e+0At2g35900unknown proteinS.X.H.G.
0.9198.1Contig4710_atContig4710--3e-1At2g17560HMGB4 (HIGH MOBILITY GROUP B 4)S.X.H.G.
0.7388.7HVSMEn0024D12r2_atHVSMEn0024D12r2--5e-1At1g34520long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinS.X.H.G.
0.6784.7Contig2632_s_atContig2632--4e+0At5g37550unknown proteinS.X.H.G.
0.5066.9Contig5376_atContig5376--3e+0At3g44950glycine-rich proteinS.X.H.G.
0.5066.9Contig8661_atContig8661--1e+0At3g48298unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.299.4GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.799.0GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.698.8GSM372957genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.698.8GSM261063Xantha s-46 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.598.8GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.198.7GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.098.7GSM310867lina_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
7.498.5GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
7.498.5GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.298.5GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9701112Contig4707_atContig4707--5e+0At2g35900unknown proteinC.G.S.X.
0.790702HVSMEm0004L13r2_s_atHVSMEm0004L13r2--4e+0At2g0439040S ribosomal protein S17 (RPS17A)C.G.S.X.
0.572e-99361HT12J09u_x_atHT12J09u--6e-1At3g43490zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.572e-99361HT12J09u_atHT12J09u--6e-1At3g43490zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.029e-340Contig7622_atContig7622--2e-7At3g18380sequence-specific DNA binding / transcription factorC.G.S.X.
0.034e-238Contig234_s_atContig234--3e-20At5g59690histone H4C.G.S.X.
0.041e-136Contig17462_atContig17462--1e+0At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)C.G.S.X.
0.021e-136Contig8970_atContig8970--1e-2At5g20560beta-1,3-glucanase, putativeC.G.S.X.
0.031e-136Contig2470_s_atContig2470--1e-1At4g16380metal ion bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt2g35900818163unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleus;P---C.G.S.X.
0.032e+034Glycine maxPsAffx.psHB005xJ07f_atPsAffx.psHB005xJ07f--4e+0At5g66860-C.G.S.X.
0.157e-1065Oryza sativaOs05g0344200BI812679-Hypothetical protein3e+0At2g02350SKIP3 (SKP1 INTERACTING PARTNER 3)C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.215734.1.S1_atpmrna30096hypothetical protein-2e+0At4g12850far-red impaired responsive family protein / FAR1 family proteinC.G.S.X.
0.551e-74280Triticum aestivumTa.23362.2.S1_atCA639097--2e+0At5g61130PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1)C.G.S.X.
0.039e-236Vitis vinifera1611797_atCF208103hypothetical protein LOC100257001-3e-38At2g30060Ran-binding protein 1b (RanBP1b)C.G.S.X.
0.123e-548Zea maysZm.16502.4.A1_atCK986103hypothetical protein LOC100277865 /// hypothetical protein LOC100280121-1e-1At1g51080unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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