Gene omics information

Query gene ID Contig4486_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8694.8Contig4486_atContig4486--4e-1At5g16470zinc finger (C2H2 type) family proteinS.X.H.G.
0.7187.1Contig2053_atContig2053--5e+0At2g38880NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1)S.X.H.G.
0.5066.9HF13G03r_atHF13G03r--4e+0At2g30020protein phosphatase 2C, putative / PP2C, putativeS.X.H.G.
0.3950.5Contig1012_s_atContig1012--2e-43At2g34420LHB1B2S.X.H.G.
0.3037.0Contig9330_atContig9330--5e-2At5g41190-S.X.H.G.
0.2835.5Contig12867_atContig12867--9e-41At1g34430EMB3003 (embryo defective 3003)S.X.H.G.
0.2630.4Contig4672_atContig4672--4e-71At5g10840endomembrane protein 70, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.198.4GSM31124928-4_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
6.398.1GSM372993genotype: 11542 - pathogen isolates: K1 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.097.9GSM372974genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.997.9GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
5.997.9GSM71147OWB-D unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
5.897.8GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
5.897.8GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stress
5.697.7GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
4.897.0GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stress
4.897.0GSM363461Control (C) - rep2GSE14521Late response to boron toxicity in barley leaves
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.522e-164577Contig4487_s_atContig4487--4e-1At5g16470zinc finger (C2H2 type) family proteinC.G.S.X.
0.543e-74278Contig4489_s_atContig4489--3e+0At2g29525-C.G.S.X.
0.063e-961HR01I06u_atHR01I06u--3e+0At4g23080unknown proteinC.G.S.X.
0.051e-240HZ40B21r_s_atHZ40B21r--2e+0At4g33460ATNAP13C.G.S.X.
0.025e-238Contig5933_atContig5933--2e-6At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)C.G.S.X.
0.022e-136Contig10395_atContig10395--3e-1At2g36300integral membrane Yip1 family proteinC.G.S.X.
0.028e-134Contig17728_atContig17728--2e+0At3g21510AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)C.G.S.X.
0.028e-134Contig2253_s_atContig2253--2e+0At5g46873-C.G.S.X.
0.048e-134HVSMEn0022J01r2_atHVSMEn0022J01r2--6e-1At3g29370unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.064e-136Arabidopsis thalianaAt5g16470831508zinc finger (C2H2 type) family proteinF:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;POM---C.G.S.X.
0.292e-1273Glycine maxGmaAffx.90489.1.S1_s_atCF806214--3e-1At5g16470zinc finger (C2H2 type) family proteinC.G.S.X.
0.341e-79297Oryza sativaOs06g0708600AK100915.1-Conserved hypothetical protein1e-1At1g57906-C.G.S.X.
0.076e-446Populus trichocarpaPtpAffx.223380.1.S1_s_atpmrna41349hypothetical protein-7e-6At3g02790zinc finger (C2H2 type) family proteinC.G.S.X.
0.726e-145513Triticum aestivumTa.6665.3.S1_x_atCA693203--4e-1At5g16470zinc finger (C2H2 type) family proteinC.G.S.X.
0.244e-1787Vitis vinifera1613913_atBQ794958--1e+0At2g40600appr-1-p processing enzyme family proteinC.G.S.X.
0.328e-56216Zea maysZm.13741.1.A1_atCK828166hypothetical protein LOC100192567-3e-2At3g02790zinc finger (C2H2 type) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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