Gene omics information

Query gene ID Contig4477_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4477_atContig4477--4e-2At4g10610CID12S.X.H.G.
0.2021.1Contig17523_atContig17523--7e-2At4g08230glycine-rich proteinS.X.H.G.
0.1514.1Contig9703_atContig9703--3e+0At2g37200integral membrane protein, putativeS.X.H.G.
0.1210.4Contig6733_atContig6733--6e-2At3g44720ADT4 (arogenate dehydratase 4)S.X.H.G.
0.032.6Contig272_s_atContig272--5e-1At3g45230hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.032.6HW01F06u_atHW01F06u--3e+0At5g58360ATOFP3S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
87.1100.0GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
56.0100.0GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
51.8100.0GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
42.399.9GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
29.799.9GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
23.299.8GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
15.199.5GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
15.099.5GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
11.099.2GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.698.2GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.810874Contig4478_atContig4478--7e-1At4g01200C2 domain-containing proteinC.G.S.X.
0.776e-160563Contig4479_s_atContig4479--7e-1At4g01200C2 domain-containing proteinC.G.S.X.
0.392e-58226Contig12510_atContig12510--4e-1At5g26790unknown proteinC.G.S.X.
0.193e-44178HS07A14u_x_atHS07A14u--2e+1At5g52965unknown proteinC.G.S.X.
0.173e-32139HS07H01u_x_atHS07H01u--5e+0At5g43210endo/excinuclease amino terminal domain-containing proteinC.G.S.X.
0.085e-961Contig13380_atContig13380--2e-2At4g19270unknown proteinC.G.S.X.
0.035e-652Contig11037_atContig11037--7e+0At5g23908unknown proteinC.G.S.X.
0.022e-240Contig5918_atContig5918--9e-6At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
0.032e-240Contig5915_atContig5915--8e-1At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-240Arabidopsis thalianaAt4g10610826653CID12RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).---C.G.S.X.
0.031e-346Glycine maxGma.4901.2.S1_atBF071542--2e-4At2g21780unknown proteinC.G.S.X.
0.328e-36153Oryza sativaOs03g03457009631.m02244-Hypothetical protein3e-3At1g22990heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedC.G.S.X.
0.039e-136Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.522e-96353Triticum aestivumTa.9290.1.S1_atCD865398--8e-1At1g14455unknown proteinC.G.S.X.
0.031e-240Vitis vinifera1616806_atCF605749hypothetical protein LOC100259004-6e-2At2g01340unknown proteinC.G.S.X.
0.133e-1685Zea maysZm.949.1.A1_atCF624182--1e-1At5g15970KIN2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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