Gene omics information

Query gene ID Contig4435_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3647.1Contig4435_atContig4435--2e-3At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.4863.2Contig20128_atContig20128--3e-7At3g52940FK (FACKEL)S.X.H.G.
0.4356.4Contig3288_x_atContig3288--5e+0At3g51325zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.2935.5HB18H23r_s_atHB18H23r--3e+0At5g01600ATFER1S.X.H.G.
0.2528.9Contig7491_atContig7491--3e-14At3g01540DRH1 (DEAD BOX RNA HELICASE 1)S.X.H.G.
0.032.6Contig12071_atContig12071--6e-1At5g60360AALP (Arabidopsis aleurain-like protease)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.699.9GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
24.199.8GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
21.799.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
18.299.7GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
16.399.6GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
15.099.5GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
14.499.5GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
13.599.5GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
12.599.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
12.099.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.720741Contig4433_s_atContig4433--2e-5At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.720741Contig4433_atContig4433--2e-5At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.235e-51200Contig9075_s_atContig9075--1e-1At5g59990-C.G.S.X.
0.182e-23109Contig5808_atContig5808--2e+0At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.192e-1995Contig3779_x_atContig3779--3e-1At4g39250ATRL1 (ARABIDOPSIS RAD-LIKE 1)C.G.S.X.
0.199e-1993Contig3777_atContig3777--3e-1At4g39250ATRL1 (ARABIDOPSIS RAD-LIKE 1)C.G.S.X.
0.189e-1993Contig3782_x_atContig3782--1e+0At4g33660unknown proteinC.G.S.X.
0.189e-1993Contig3774_s_atContig3774--5e+0At5g14530transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.209e-1993Contig3778_x_atContig3778--3e-1At4g39250ATRL1 (ARABIDOPSIS RAD-LIKE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.122e-344Arabidopsis thalianaAt1g62510842548protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFA---C.G.S.X.
0.069e-652Glycine maxGma.6146.1.S1_atBI969869--3e-8At5g46890protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.237e-41169Oryza sativaOs02g0662000AK109149.1-RCc3 protein1e-1At2g25820transcription factorC.G.S.X.
0.051e-138Populus trichocarpaPtpAffx.224082.1.S1_x_atpmrna42319hypothetical protein-1e-2At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)C.G.S.X.
0.738e-132470Triticum aestivumTa.7436.1.A1_atCA706847--2e-3At4g12545protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.042e+032Vitis vinifera1620940_atCF201899.1--2e+1At5g66990RWP-RK domain-containing proteinC.G.S.X.
0.241e-1789Zea maysZm.1835.1.A1_atCK368819cortical cell-delineating protein-2e+0At2g25820transcription factorC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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