Gene omics information

Query gene ID Contig4373_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4373_atContig4373--4e-2At1g764703-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductaseS.X.H.G.
0.5268.3Contig3102_atContig3102--2e-13At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)S.X.H.G.
0.4559.3Contig5778_atContig5778--2e-10At4g22260IM (IMMUTANS)S.X.H.G.
0.4458.9rbags18j12_s_atrbags18j12--3e-6At1g65980TPX1 (thioredoxin-dependent peroxidase 1)S.X.H.G.
0.4356.4Contig4563_atContig4563--5e-15At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)S.X.H.G.
0.4255.2Contig8706_atContig8706--5e-4At4g32400SHS1 (SODIUM HYPERSENSITIVE 1)S.X.H.G.
0.4053.1Contig2826_s_atContig2826--1e-21At3g44110ATJ3S.X.H.G.
0.3950.5Contig5874_s_atContig5874--1e+0At1g48610AT hook motif-containing proteinS.X.H.G.
0.3950.5Contig4880_x_atContig4880--2e-20At1g61800GPT2S.X.H.G.
0.3950.5Contig6012_atContig6012--6e-16At3g62580-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.598.8GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
6.198.0GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
5.997.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
5.897.8GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.196.2GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.096.0GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
3.995.8GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.795.5GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.695.3GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.595.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7501009Contig4374_s_atContig4374--6e-1At2g33600cinnamoyl-CoA reductase familyC.G.S.X.
0.520845Contig4372_s_atContig4372--9e-1At1g764703-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductaseC.G.S.X.
0.386e-61234rbags17k13_x_atrbags17k13--4e+0At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.386e-61234rbags17k13_s_atrbags17k13--4e+0At5g37780CAM1 (CALMODULIN 1)C.G.S.X.
0.041e-1273Contig8527_atContig8527--7e-1At1g80820CCR2 (CINNAMOYL COA REDUCTASE)C.G.S.X.
0.041e-1273Contig11338_atContig11338--2e-4At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.145e-1271Contig18594_atContig18594--1e-1At4g28250ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)C.G.S.X.
0.043e-1065Contig2384_atContig2384--2e-1At5g25570unknown proteinC.G.S.X.
0.033e-756Contig3928_s_atContig3928--1e-14At1g51410cinnamyl-alcohol dehydrogenase, putative (CAD)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.074e-240Arabidopsis thalianaAt1g764708439803-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductaseF:3-beta-hydroxy-delta5-steroid dehydrogenase activity, binding, cinnamoyl-CoA reductase activity, catalytic activity;P:lignin biosynthetic process, steroid biosynthetic process, metabolic process;C:endomembrane system;OBPFMAV---C.G.S.X.
0.056e-240Glycine maxGma.1445.3.S1_a_atBE805686--9e-10At1g15950CCR1 (CINNAMOYL COA REDUCTASE 1)C.G.S.X.
0.635e-148525Oryza sativaOs06g0623300AK102436.1-Conserved hypothetical protein6e-1At2g33600cinnamoyl-CoA reductase familyC.G.S.X.
0.061e-552Populus trichocarpaPtpAffx.51327.3.S1_atCV245418hypothetical protein-3e-1At5g02360DC1 domain-containing proteinC.G.S.X.
0.8001513Triticum aestivumTa.28358.1.S1_atCA632030--3e-3At1g764703-beta-hydroxy-delta5-steroid dehydrogenase/ binding / catalytic/ cinnamoyl-CoA reductaseC.G.S.X.
0.023e+032Vitis vinifera1618358_atCD715932--3e-1At5g46780VQ motif-containing proteinC.G.S.X.
0.483e-44178Zea maysZm.3297.1.A1_atBM380456dihydroflavonol-4-reductase-7e-1At4g01360-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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