Gene omics information

Query gene ID Contig4305_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5774.9Contig4305_s_atContig4305--5e+0At5g06690WCRKC1 (WCRKC THIOREDOXIN 1)S.X.H.G.
0.8394.0Contig17881_atContig17881--4e-1At4g17580Bax inhibitor-1 family protein / BI-1 family proteinS.X.H.G.
0.7388.7HU06E17r_atHU06E17r--2e-3At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)S.X.H.G.
0.7388.7HA05b17r_atHA05b17r--3e-13At1g09210calreticulin 2 (CRT2)S.X.H.G.
0.6178.7Contig11950_atContig11950--8e+0At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeS.X.H.G.
0.3138.6Contig6521_atContig6521--4e+0At5g63480unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.499.9GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
41.799.9GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
27.899.8GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.898.6GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.398.1GSM282030Malting_day4_Harrington_rep2GSE11200Expression data from malting barley seeds
6.097.9GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.497.5GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.397.4GSM261079Albina e-16 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.997.1GSM16081938% SWC rep1GSE6990Barley drought stress
4.496.6GSM261022ABA-Control-rep2GSE10328ABA experiment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.350636Contig4304_atContig4304--3e-12At1g09140SF2/ASF-like splicing modulator (SRP30)C.G.S.X.
0.631e-119428HU02A01u_s_atHU02A01u--4e+0At5g60330unknown proteinC.G.S.X.
0.631e-119428HU02A01u_atHU02A01u--4e+0At5g60330unknown proteinC.G.S.X.
0.096e-1063Contig16119_atContig16119--8e+0Atcg01060-C.G.S.X.
0.044e-238Contig5234_atContig5234--5e-11At1g09140SF2/ASF-like splicing modulator (SRP30)C.G.S.X.
0.034e-238Contig11884_atContig11884--2e+1At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
0.064e-238Contig5235_s_atContig5235--4e-7At1g09140SF2/ASF-like splicing modulator (SRP30)C.G.S.X.
0.026e-134Contig3614_atContig3614--5e-2At5g38470DNA repair protein RAD23, putativeC.G.S.X.
0.032e+032HVSMEc0009D21r2_atHVSMEc0009D21r2--1e-3At2g04900unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Arabidopsis thalianaAt5g06690830558WCRKC1 (WCRKC THIOREDOXIN 1)Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif.---C.G.S.X.
0.031e-138Glycine maxHgAffx.11428.1.S1_atCB935022--5e+0At2g22510hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.084e-859Oryza sativaOs07g0673500AK072839.1--7e-11At3g49430SRp34a (Ser/Arg-rich protein 34a)C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.84340.1.A1_atCK089707--4e-2At3g55420unknown proteinC.G.S.X.
0.629e-159559Triticum aestivumTa.3227.1.A1_a_atCA722663alternative splicing regulator-5e-1At5g59540oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.042e-238Vitis vinifera1608974_atCB343752--1e+0At5g40700unknown proteinC.G.S.X.
0.073e-857Zea maysZm.10359.1.S1_atT69043ASF/SF2-like pre-mRNA splicing factor SRP32-2e-19At1g09140SF2/ASF-like splicing modulator (SRP30)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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