Gene omics information

Query gene ID	Contig4290_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	84.7	Contig4290_at	Contig4290	-	-	4e-15	At4g32390	phosphate translocator-related	S.X.	H.G.	Please select
0.73	88.7	Contig7557_s_at	Contig7557	-	-	6e-18	At5g17530	phosphoglucosamine mutase family protein	S.X.	H.G.	Please select
0.50	66.9	Contig9136_at	Contig9136	-	-	1e-5	At3g51140	-	S.X.	H.G.	Please select
0.32	40.3	Contig6995_at	Contig6995	-	-	2e-8	At5g57270	unknown protein	S.X.	H.G.	Please select
0.21	22.6	Contig6581_at	Contig6581	-	-	6e-2	At3g26330	CYP71B37	S.X.	H.G.	Please select
0.18	18.2	Contig3633_s_at	Contig3633	-	-	7e-1	At3g13480	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.1	98.9	GSM372964	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.1	98.7	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM372963	genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.0	97.2	GSM261035	Dicktoo-chilling-rep3	GSE10329	Low temperature stress in cv. Dicktoo
5.0	97.2	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
4.8	97.0	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.7	96.9	GSM372954	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.5	96.7	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
4.5	96.7	GSM372952	genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.54	0	1213	Contig4291_at	Contig4291	-	-	2e-26	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.02	6e-3	42	Contig16125_at	Contig16125	-	-	7e+0	At4g28397	-	C.G.	S.X.	Please select
0.02	6e-3	42	Contig21246_at	Contig21246	-	-	3e-2	At5g07600	oleosin / glycine-rich protein	C.G.	S.X.	Please select
0.01	6e-3	42	Contig3873_at	Contig3873	-	-	3e-20	At1g01060	LHY (LATE ELONGATED HYPOCOTYL)	C.G.	S.X.	Please select
0.02	3e-2	40	Contig13240_s_at	Contig13240	-	-	4e-1	At3g24750	unknown protein	C.G.	S.X.	Please select
0.01	3e-2	40	Contig3058_at	Contig3058	-	-	2e-4	At1g22990	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	C.G.	S.X.	Please select
0.02	3e-2	40	HVSMEf0021O19r2_s_at	HVSMEf0021O19r2	-	-	5e-6	At3g02020	AK3 (ASPARTATE KINASE 3)	C.G.	S.X.	Please select
0.01	1e-1	38	Contig6894_at	Contig6894	-	-	2e-17	At3g57610	ADSS (ADENYLOSUCCINATE SYNTHASE)	C.G.	S.X.	Please select
0.02	1e-1	38	Contig64_at	Contig64	-	-	2e-2	At4g39260	GR-RBP8	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	4e-15	83	Arabidopsis thaliana	At4g32390	829374	phosphate translocator-related	F:organic anion transmembrane transporter activity;P:unknown;C:endomembrane system;PMFOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.29	8e-45	182	Glycine max	GmaAffx.46678.1.S1_at	BQ080717	-	-	3e-28	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.72	0	1261	Oryza sativa	Os05g0494500	AK071846.1	-	Conserved hypothetical protein	1e-14	At2g25520	phosphate translocator-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	5e-6	54	Populus trichocarpa	PtpAffx.214193.1.S1_x_at	pmrna27615	hypothetical protein	-	8e-71	At2g25520	phosphate translocator-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.83	0	2234	Triticum aestivum	Ta.20707.1.S1_at	CK207040	-	-	1e-15	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.28	4e-49	194	Vitis vinifera	1611048_at	CB970151	hypothetical protein LOC100255990	-	2e-21	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select
0.65	0	1178	Zea mays	Zm.15448.1.S1_at	CD448349	plastidic phosphate translocator-like protein1	-	4e-24	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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