Gene omics information

Query gene ID Contig4273_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig4273_atContig4273--3e+0At3g60440-S.X.H.G.
0.1818.2Contig10488_s_atContig10488--2e-2At5g19930integral membrane family proteinS.X.H.G.
0.1210.4Contig20575_atContig20575--7e+0At5g63740zinc finger protein-relatedS.X.H.G.
0.108.4Contig15375_atContig15375--2e+0At5g49410unknown proteinS.X.H.G.
0.075.8Contig8035_atContig8035--4e-2At4g14930acid phosphatase survival protein SurE, putativeS.X.H.G.
0.054.1Contig8944_atContig8944--6e-4At2g22670IAA8S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.799.5GSM372978genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.899.4GSM372989genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.899.3GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.799.3GSM372991genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.399.3GSM372986genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.399.1GSM373009genotype: 11542 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.299.1GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.299.1GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.099.1GSM372949genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.999.1GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.547e-135480Contig9486_atContig9486--1e-2At2g38240oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.161e-1997HV12C16u_s_atHV12C16u--3e-1At3g07380unknown proteinC.G.S.X.
0.161e-1997HV12C16u_atHV12C16u--3e-1At3g07380unknown proteinC.G.S.X.
0.274e-1995Contig10361_atContig10361--2e-4At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.062e-550Contig3567_atContig3567--1e-2At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.012e-240Contig583_atContig583--2e-13At1g79230MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1)C.G.S.X.
0.019e-238Contig6518_atContig6518--9e-16At3g01480CYP38 (cyclophilin 38)C.G.S.X.
0.023e-136Contig6101_atContig6101--1e-10At1g07370PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)C.G.S.X.
0.033e-136Contig12782_atContig12782--4e-5At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Arabidopsis thalianaAt3g60440825215-F:unknown;P:unknown;C:chloroplast;OFBPM---C.G.S.X.
0.026e-240Glycine maxGma.431.2.S1_a_atBI785751proliferating cell nuclear antigen-1e-46At1g07370PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN)C.G.S.X.
0.119e-550Oryza sativaOs06g0176700NM_185692.1-Iron/ascorbate-dependent oxidoreductase6e-1At5g54000oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.222898.1.S1_s_atpmrna40613hypothetical protein-2e+0At5g46490disease resistance protein (TIR-NBS class), putativeC.G.S.X.
0.8301552Triticum aestivumTa.28233.1.S1_atCA599187--7e-1At5g20400oxidoreductase, 2OG-Fe(II) oxygenase family proteinC.G.S.X.
0.022e-136Vitis vinifera1611472_atCB342615hypothetical protein LOC100263826-1e-10At4g17560ribosomal protein L19 family proteinC.G.S.X.
0.058e-857Zea maysZm.14705.1.S1_atCA405205leucoanthocyanidin dioxygenase-2e+0At1g35320unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage