Gene omics information

Query gene ID Contig41_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8694.8Contig41_x_atContig41--5e-28At1g09200histone H3S.X.H.G.
0.7790.8HW02O23u_s_atHW02O23u--1e+1Atcg01080-S.X.H.G.
0.6178.7Contig19848_atContig19848--5e+0At5g20165unknown proteinS.X.H.G.
0.6077.3Contig592_atContig592--2e-4At1g11860aminomethyltransferase, putativeS.X.H.G.
0.5774.9HVSMEh0085K02r2_atHVSMEh0085K02r2--2e+0At5g42750BKI1 (BRI1 kinase inhibitor 1)S.X.H.G.
0.5774.9Contig24619_atContig24619--1e-1At5g03455CDC25S.X.H.G.
0.4762.2Contig2958_atContig2958--3e+0At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.898.3GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.298.0GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
6.298.0GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.997.9GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.597.6GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.397.4GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.297.4GSM238414Endosperm 8DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.796.9GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.696.8GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9701368Contig41_atContig41--5e-28At1g09200histone H3C.G.S.X.
0.540638Contig570_s_atContig570--3e-23At1g09200histone H3C.G.S.X.
0.632e-180630Contig40_x_atContig40histone H3 protein-3e-32At5g10980histone H3C.G.S.X.
0.573e-148523Contig75_atContig75--8e-45At1g09200histone H3C.G.S.X.
0.573e-148523Contig75_x_atContig75--8e-45At1g09200histone H3C.G.S.X.
0.553e-148523Contig135_atContig135--1e-37At1g09200histone H3C.G.S.X.
0.557e-146515Contig130_atContig130--2e-42At1g09200histone H3C.G.S.X.
0.562e-142504Contig124_atContig124--1e-40At1g09200histone H3C.G.S.X.
0.541e-141502Contig94_atContig94--4e-47At1g09200histone H3C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.545e-28125Arabidopsis thalianaAt1g09200837440histone H3F:DNA binding;P:nucleosome assembly;C:nucleus, chloroplast, nucleosome;MFPO---C.G.S.X.
0.587e-108391Glycine maxPsAffx.C1000261_atPsAffx.C1000261--1e-15At5g10980histone H3C.G.S.X.
0.564e-98359Oryza sativaOs11g0155900U77296.1-Histone H32e-57At1g09200histone H3C.G.S.X.
0.451e-26121Populus trichocarpaPtp.6718.1.S1_s_atCF231591histone H3-1e-59At4g40030histone H3.2C.G.S.X.
0.566e-151533Triticum aestivumTa.28621.1.S1_atCA597456--5e-31At1g09200histone H3C.G.S.X.
0.488e-55212Vitis vinifera1620332_atCF415733similar to predicted protein-1e-71At5g10390histone H3C.G.S.X.
0.519e-142502Zea maysZm.14513.1.A1_atCA828306Histone H3.2-6e-37At1g09200histone H3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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