Gene omics information

Query gene ID Contig4175_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4175_atContig4175--1e-19At3g07100protein transport protein Sec24, putativeS.X.H.G.
0.8092.5Contig4760_s_atContig4760--1e+0At4g38700disease resistance-responsive family proteinS.X.H.G.
0.7388.7Contig5297_atContig5297--4e-16At1g64550ATGCN3S.X.H.G.
0.7187.1Contig11464_atContig11464--6e-20At1g55740AtSIP1 (Arabidopsis thaliana seed imbibition 1)S.X.H.G.
0.6784.7Contig5117_atContig5117--8e-2At5g60500undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family proteinS.X.H.G.
0.6178.7Contig6995_atContig6995--2e-8At5g57270unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.798.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.396.4GSM372946genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.296.3GSM382237Root_Control3GSE15295Mercury toxicity in barley roots
3.995.8GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
3.895.7GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.895.7GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.695.3GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
3.494.8GSM372952genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.494.8GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
3.294.3GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.171e-174613Contig4174_atContig4174--6e-1At4g01700chitinase, putativeC.G.S.X.
0.016e-136HV_CEb0015I04r2_atHV_CEb0015I04r2--4e+0At5g53660AtGRF7 (GROWTH-REGULATING FACTOR 7)C.G.S.X.
0.016e-136rbaal17j15_atrbaal17j15--1e+0At5g50040invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.016e-136Contig24209_atContig24209--2e-6At4g01880methyltransferaseC.G.S.X.
0.012e+034HVSMEa0004C17r2_atHVSMEa0004C17r2--3e-1At5g42900unknown proteinC.G.S.X.
0.012e+034Contig4641_s_atContig4641--2e-3At4g0081060S acidic ribosomal protein P1 (RPP1B)C.G.S.X.
0.012e+034Contig6104_atContig6104--1e-3At3g57520AtSIP2 (Arabidopsis thaliana seed imbibition 2)C.G.S.X.
0.012e+034HVSMEk0009P03r2_atHVSMEk0009P03r2--5e-9At5g57140PAP28 (PURPLE ACID PHOSPHATASE 28)C.G.S.X.
0.012e+034Contig3705_atContig3705--7e-3At3g06860MFP2 (MULTIFUNCTIONAL PROTEIN 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.101e-1999Arabidopsis thalianaAt3g07100819896protein transport protein Sec24, putativeF:protein binding, transporter activity, zinc ion binding;P:intracellular protein transport, transport, ER to Golgi vesicle-mediated transport;C:COPII vesicle coat;MFBOPVA---C.G.S.X.
0.181e-25119Glycine maxGmaAffx.76737.1.S1_atBF324681--4e-36At3g07100protein transport protein Sec24, putativeC.G.S.X.
0.5902189Oryza sativaOs04g0129500AK071986.1-Sec23/Sec24 zinc finger domain containing protein7e-31At3g07100protein transport protein Sec24, putativeC.G.S.X.
0.196e-1997Populus trichocarpaPtpAffx.207677.1.S1_s_atpmrna15246hypothetical protein-2e-73At3g07100protein transport protein Sec24, putativeC.G.S.X.
0.8002660Triticum aestivumTaAffx.6598.1.S1_atCD938071--1e-19At3g07100protein transport protein Sec24, putativeC.G.S.X.
0.012e+034Vitis vinifera1621163_atBQ799269hypothetical protein LOC100253488-1e-6At5g58490cinnamoyl-CoA reductase familyC.G.S.X.
0.6901588Zea maysZm.6026.1.S1_atCA405322hypothetical protein LOC100194158-7e-21At3g07100protein transport protein Sec24, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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