Gene omics information

Query gene ID Contig416_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4863.2Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)S.X.H.G.
0.7388.7Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.7187.1Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.6784.7Contig6860_atContig6860--8e-4At5g66815unknown proteinS.X.H.G.
0.5975.8rbaak4i15_s_atrbaak4i15--2e-6At5g08680ATP synthase beta chain, mitochondrial, putativeS.X.H.G.
0.5572.0HA06i14r_s_atHA06i14r--8e-4At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
34.299.9GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
33.999.9GSM282029Malting_day1_Merit_rep3GSE11200Expression data from malting barley seeds
31.799.9GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
27.199.8GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
23.799.8GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
14.299.5GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.198.7GSM282024Malting_day4_Merit_rep2GSE11200Expression data from malting barley seeds
7.798.6GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.798.6GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
6.998.3GSM431548pathogen isolates: Mock - rep3GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.4901142Contig91_atContig91--2e-67At4g24190SHD (SHEPHERD)C.G.S.X.
0.668e-171599Contig71_s_atContig71GRP94 homologue-1e-9At4g24190SHD (SHEPHERD)C.G.S.X.
0.386e-101367Contig568_s_atContig568GRP94 homologue-4e-2At1g06240unknown proteinC.G.S.X.
0.073e-1685EBro08_SQ012_P22_atEBro08_SQ012_P22--1e-2At1g07340ATSTP2 (SUGAR TRANSPORTER 2)C.G.S.X.
0.027e-548Contig1204_s_atContig1204cytosolic heat shock protein 90-0At5g56010HSP81-3C.G.S.X.
0.041e-344Contig25388_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.041e-344Contig25388_s_atContig25388--5e-6At2g19790clathrin adaptor complex small chain family proteinC.G.S.X.
0.032e-240Contig1206_s_atContig1206--0At5g56000heat shock protein 81-4 (HSP81-4)C.G.S.X.
0.042e-240Contig1207_atContig1207--2e-55At5g56000heat shock protein 81-4 (HSP81-4)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.135e-29129Arabidopsis thalianaAt4g24190828520SHD (SHEPHERD)encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.---C.G.S.X.
0.265e-1479Glycine maxGmaAffx.91200.1.S1_s_atCF806925--1e-40At4g24190SHD (SHEPHERD)C.G.S.X.
0.400737Oryza sativaOs08g0104600D30763.1-Ferredoxin I, chloroplast precursor (Anti-diseaseprotein 1)6e-33At4g24190SHD (SHEPHERD)C.G.S.X.
0.162e-757Populus trichocarpaPtpAffx.3203.4.A1_atCV241731hypothetical protein-7e-59At4g24190SHD (SHEPHERD)C.G.S.X.
0.456e-87321Triticum aestivumTa.28235.1.A1_s_atBJ214932--5e+0At5g50760auxin-responsive family proteinC.G.S.X.
0.115e-29127Vitis vinifera1608448_atBQ792197hypothetical protein LOC100267648-1e-45At4g24190SHD (SHEPHERD)C.G.S.X.
0.550732Zea maysZm.5048.6.A1_a_atBM380925hypothetical protein LOC100279926 /// endoplasmin-3e-36At4g24190SHD (SHEPHERD)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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