Gene omics information

Query gene ID Contig4131_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig4131_atContig4131--2e-23At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)S.X.H.G.
0.5066.9Contig7152_atContig7152--2e-34At3g58600-S.X.H.G.
0.4661.0Contig22861_atContig22861--7e+0At3g59880unknown proteinS.X.H.G.
0.4458.9Contig2846_atContig2846--3e-5At2g27285unknown proteinS.X.H.G.
0.4458.9Contig16073_atContig16073--3e-2At5g37200zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4255.2Contig6905_s_atContig6905--2e+0At4g19620unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.499.7GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
16.799.6GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.399.6GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
14.099.5GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
13.199.4GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
11.499.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
11.399.3GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.299.2GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
10.499.2GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.999.1GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.442e-147521Contig4135_atContig4135--2e-7At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)C.G.S.X.
0.309e-45180Contig4292_atContig4292--9e-22At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)C.G.S.X.
0.012e-240Contig20118_atContig20118--8e-22At5g17460unknown proteinC.G.S.X.
0.013e-136Contig9903_atContig9903--1e-2At3g20500PAP18 (PURPLE ACID PHOSPHATASE 18)C.G.S.X.
0.013e-136Contig1406_atContig1406--1e-2At2g32290BAM6 (BETA-AMYLASE 6)C.G.S.X.
0.011e+034Contig7556_s_atContig7556--5e-1At1g21326VQ motif-containing proteinC.G.S.X.
0.021e+034HS09F12u_s_atHS09F12u--7e-1At2g33780VQ motif-containing proteinC.G.S.X.
0.021e+034Contig22553_atContig22553--1e-3At3g52910AtGRF4 (GROWTH-REGULATING FACTOR 4)C.G.S.X.
0.011e+034Contig16102_atContig16102--2e-13At4g19540INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.272e-23111Arabidopsis thalianaAt1g77490844085TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.---C.G.S.X.
0.296e-33143Glycine maxGma.10720.2.S1_a_atAW396215--6e-76At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)C.G.S.X.
0.520985Oryza sativaOs04g0434800AB114855.1-Stromal ascorbate peroxidase9e-19At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)C.G.S.X.
0.271e-27125Populus trichocarpaPtp.280.1.A1_atBP930644hypothetical protein-1e-81At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)C.G.S.X.
0.7801782Triticum aestivumTa.19870.1.S1_a_atBQ482857--1e-18At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)C.G.S.X.
0.322e-1789Vitis vinifera1621336_atCD798795hypothetical protein LOC100254009-1e-84At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)C.G.S.X.
0.500975Zea maysZm.5762.1.A1_atAI649475hypothetical protein LOC100194161-9e-53At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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