Gene omics information

Query gene ID Contig4110_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig4110_s_atContig4110--5e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4458.9HU10P16u_atHU10P16u--2e-1At2g38810HTA8 (HISTONE H2A 8)S.X.H.G.
0.4053.1HS18M03u_s_atHS18M03u--6e-1At2g20070-S.X.H.G.
0.2528.9Contig1050_s_atContig1050--4e-162At4g02890UBQ14S.X.H.G.
0.097.4Contig690_s_atContig690--4e-1At1g06540unknown proteinS.X.H.G.
0.021.8Contig1580_x_atContig1580precursor thionin-3e-1At1g28490SYP61 (SYNTAXIN OF PLANTS 61)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
18.599.7GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
18.599.7GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
18.399.7GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.799.7GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
17.799.7GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
11.199.2GSM398259Martin_5d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.099.2GSM1608317% SWC rep1GSE6990Barley drought stress
10.599.2GSM398256Martin_3d_rep2GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.799.0GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
9.799.0GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9902819Contig4110_atContig4110--5e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.470956bah24p14_atbah24p14--8e-2At4g09170unknown proteinC.G.S.X.
0.306e-123440rbaal21j20_s_atrbaal21j20--8e+0At3g43432unknown proteinC.G.S.X.
0.076e-652AF474072_CDS-4_atAF474072_CDS-4--1e+0At5g05810ATL43C.G.S.X.
0.029e-238Contig4721_s_atContig4721--1e-3At5g41010NRPB12C.G.S.X.
0.029e-238Contig4723_atContig4723--2e-11At5g41010NRPB12C.G.S.X.
0.013e-136Contig7721_atContig7721--7e-1At1g24450NFD2 (NUCLEAR FUSION DEFECTIVE 2)C.G.S.X.
0.013e-136Contig5099_atContig5099--7e-13At5g24420glucosamine/galactosamine-6-phosphate isomerase-relatedC.G.S.X.
0.023e-136Contig4820_s_atContig4820--1e-2At1g63390flavin-containing monooxygenase-related / FMO-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e-240Arabidopsis thalianaAt5g41400834142zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVB---C.G.S.X.
0.021e+036Glycine maxPsAffx.CL575Contig1_atPsAffx.CL575Contig1--5e-1At1g64490unknown proteinC.G.S.X.
0.243e-60234Oryza sativaOs02g0759400AY579411.1-Zn-finger, RING domain containing protein7e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.022e+132Populus trichocarpaPtpAffx.216774.1.S1_s_atpmrna31761hypothetical protein-1e+0At4g30820cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-relatedC.G.S.X.
0.348e-149527Triticum aestivumTaAffx.100645.1.S1_atCA689015--3e-2At5g41400zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e-240Vitis vinifera1620787_s_atBM438036hypothetical protein LOC100263709-6e-40At5g35680eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putativeC.G.S.X.
0.052e-859Zea maysZm.19057.1.A1_atCO525209--4e-2At5g05280zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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