Gene omics information

Query gene ID Contig4017_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig4017_s_atContig4017--1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)S.X.H.G.
0.5369.7Contig20835_atContig20835--3e-1At5g614502-phosphoglycerate kinase-relatedS.X.H.G.
0.5066.9HA10A05u_s_atHA10A05u--4e-2At3g08940LHCB4.2 (light harvesting complex PSII)S.X.H.G.
0.4762.2rbah22f22_s_atrbah22f22--7e+0At5g51940NRPB6AS.X.H.G.
0.3849.5Contig22636_atContig22636--3e+0At2g14846protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.3545.1Contig2247_atContig2247--1e+0At3g59190F-box family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.699.3GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
11.699.3GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
11.399.3GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
11.399.3GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stress
9.299.0GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
7.498.5GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
6.798.3GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
6.798.3GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stress
6.498.1GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
6.498.1GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.970787Contig4017_atContig4017--1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)C.G.S.X.
0.540692Contig4020_atContig4020--3e+0At3g13700RNA-binding protein, putativeC.G.S.X.
0.111e-45182Contig4018_atContig4018--5e-1At1g59940ARR3 (RESPONSE REGULATOR 3)C.G.S.X.
0.214e-30131Contig12536_atContig12536--8e+0At5g17810WOX12 (WUSCHEL related homeobox 12)C.G.S.X.
0.022e-342Contig11470_atContig11470--8e-4At4g02780GA1 (GA REQUIRING 1)C.G.S.X.
0.022e-136Contig5885_atContig5885--3e+0At4g02465unknown proteinC.G.S.X.
0.032e-136HVSMEc0006O07r2_atHVSMEc0006O07r2--4e+0At5g51812unknown proteinC.G.S.X.
0.032e-136Contig13081_atContig13081--9e-2At3g25573unknown proteinC.G.S.X.
0.042e-136Contig11067_s_atContig11067--2e+0At4g09960STK (SEEDSTICK)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt2g16510816150vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)F:ATPase activity;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;MOFBPA---C.G.S.X.
0.041e-138Glycine maxGmaAffx.68856.1.S1_atBM092391--2e+0At4g21216unknown proteinC.G.S.X.
0.217e-47188Oryza sativaOs01g0615300AK061211.1-Transferase family protein2e-1At3g03480CHAT (acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase)C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.76547.1.A1_atCV226050--1e+1At4g01460basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.403e-112404Triticum aestivumTa.16646.1.S1_atCA610276--4e+0At3g52590UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)C.G.S.X.
0.042e-238Vitis vinifera1614799_atCF212957hypothetical protein LOC100255894-3e-10At4g25800calmodulin-binding proteinC.G.S.X.
0.292e-62238Zea maysZm.9948.1.A1_atCB3507883-N-debenzoyl-2-deoxytaxol N-benzoyltransferase-2e+0At1g54575unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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