Gene omics information

Query gene ID Contig3967_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3747.9Contig3967_atContig3967--6e-16At5g47040LON2 (LON PROTEASE 2)S.X.H.G.
0.5369.7HS05E04u_s_atHS05E04u--4e-3At5g35590PAA1 (PROTEASOME ALPHA SUBUNIT A 1)S.X.H.G.
0.4458.9rbaal18e24_s_atrbaal18e24--9e+0At4g06536-S.X.H.G.
0.4053.1Contig5612_atContig5612--3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.3647.1Contig6376_atContig6376--1e-10At5g09900EMB2107 (EMBRYO DEFECTIVE 2107)S.X.H.G.
0.3240.3Contig3120_atContig3120--4e-2At4g20260DREPP plasma membrane polypeptide family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.498.5GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.898.3GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.097.9GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.097.9GSM372950genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.697.7GSM372960genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.697.7GSM372941genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.497.5GSM372944genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.397.4GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.297.4GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.297.4GSM372947genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.003e-155545Contig3967_s_atContig3967--6e-16At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.112e-106383Contig3968_atContig3968--3e-45At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.112e-106383Contig3968_s_atContig3968--3e-45At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.021e-342Contig9195_atContig9195--2e-2At1g72080unknown proteinC.G.S.X.
0.024e-340Contig10346_atContig10346--8e-1At2g22080unknown proteinC.G.S.X.
0.022e-238Contig10324_atContig10324--5e-33At4g21800QQT2 (quatre-quart2)C.G.S.X.
0.022e-238Contig7151_atContig7151--5e-12At4g12610transcription initiation factor IIF alpha subunit (TFIIF-alpha) family proteinC.G.S.X.
0.036e-236Contig9796_atContig9796--5e-2At1g47970unknown proteinC.G.S.X.
0.046e-236EBem08_SQ004_F24_atEBem08_SQ004_F24--1e-3At1g03850glutaredoxin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-1683Arabidopsis thalianaAt5g47040834750LON2 (LON PROTEASE 2)Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.---C.G.S.X.
0.062e-136Glycine maxGmaAffx.77609.1.S1_atBI498210--2e+0At1g04190tetratricopeptide repeat (TPR)-containing proteinC.G.S.X.
0.091e-55216Oryza sativaOs09g0533400AY129070.1-Chaperonin clpA/B family protein2e-55At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.055e-238Populus trichocarpaPtpAffx.206492.1.S1_atpmrna12881hypothetical protein-8e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.102e-90331Triticum aestivumTa.2656.1.S1_atAY494984.1LON1 protease-8e-49At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
0.064e-236Vitis vinifera1606519_atCB342417hypothetical protein LOC100261732-2e-22At5g56950NAP1C.G.S.X.
0.103e-53206Zea maysZm.396.1.A1_atU85494.1LON peptidase1-1e-53At5g47040LON2 (LON PROTEASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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