Gene omics information

Query gene ID Contig3963_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5975.8Contig3963_s_atContig3963--7e-39At4g19210ATRLI2S.X.H.G.
0.9198.1Contig5242_atContig5242--3e-1At2g30560glycine-rich proteinS.X.H.G.
0.8394.0HA28J12r_s_atHA28J12r--1e+0At3g23255unknown proteinS.X.H.G.
0.7790.8Contig5574_atContig5574--2e-11At4g30210ATR2 (ARABIDOPSIS P450 REDUCTASE 2)S.X.H.G.
0.7388.7Contig8436_s_atContig8436--7e-2At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)S.X.H.G.
0.6784.7Contig4494_s_atContig4494--5e+0At5g55508unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.496.6GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
4.396.4GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.294.3GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seeds
2.893.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
2.893.1GSM282027Malting_day1_Legacy_rep2GSE11200Expression data from malting barley seeds
2.692.3GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
2.591.9GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
2.591.9GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
2.591.9GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
2.491.4GSM146373Golden Promise shoot Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9904609Contig3963_atContig3963--7e-39At4g19210ATRLI2C.G.S.X.
0.300864Contig3961_atContig3961--1e+0At3g29560unknown proteinC.G.S.X.
0.362e-142506HT09K07u_atHT09K07u--1e+0At3g29560unknown proteinC.G.S.X.
0.014e-240Contig19209_atContig19209--7e+0At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)C.G.S.X.
0.011e-138Contig11204_atContig11204--4e-22At1g72040deoxynucleoside kinase familyC.G.S.X.
0.016e-136Contig5099_atContig5099--7e-13At5g24420glucosamine/galactosamine-6-phosphate isomerase-relatedC.G.S.X.
0.026e-136HS03C23r_atHS03C23r--4e+0At5g45490disease resistance protein-relatedC.G.S.X.
0.016e-136Contig8285_atContig8285--3e-80At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)C.G.S.X.
0.016e-136Contig22550_atContig22550--5e+0At5g26110ATP binding / catalytic/ protein kinaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.427e-39163Arabidopsis thalianaAt4g19210827661ATRLI2member of RLI subfamily---C.G.S.X.
0.244e-44180Glycine maxGma.8114.1.S1_atCD398562--4e-45At4g19210ATRLI2C.G.S.X.
0.6802050Oryza sativaOs11g0546000AK103366.1-RNase L inhibitor-like protein4e-53At4g19210ATRLI2C.G.S.X.
0.382e-55218Populus trichocarpaPtp.2711.2.S1_a_atCV268949hypothetical protein-6e-110At4g19210ATRLI2C.G.S.X.
0.8903544Triticum aestivumTa.2776.1.S1_atAY059462.168 kDa protein HP68-7e-27At4g19210ATRLI2C.G.S.X.
0.019e-238Vitis vinifera1615747_atBQ797735hypothetical protein LOC100245687-6e-18At4g29010AIM1 (ABNORMAL INFLORESCENCE MERISTEM)C.G.S.X.
0.6601772Zea maysZm.2754.1.A1_atAY104118.1--4e-53At4g19210ATRLI2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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