Gene omics information

Query gene ID Contig3922_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7086.0Contig3922_atContig3922--2e-45At5g16070chaperonin, putativeS.X.H.G.
0.6178.7Contig15307_atContig15307--2e+0At3g15357unknown proteinS.X.H.G.
0.6178.7Contig19461_atContig19461--3e-1At1g04260MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)S.X.H.G.
0.6178.7Contig11253_atContig11253--1e+0At4g34290SWIB complex BAF60b domain-containing proteinS.X.H.G.
0.5572.0rbaal21g04_s_atrbaal21g04--6e+0At3g43480-S.X.H.G.
0.5572.0Contig13941_atContig13941--6e+0At5g37900seven in absentia (SINA) family proteinS.X.H.G.
0.3849.5Contig13943_s_atContig13943--4e+0At4g00880auxin-responsive family proteinS.X.H.G.
0.3647.1rbaal1d15_s_atrbaal1d15--3e+0At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.899.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.299.1GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.097.9GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.697.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.597.6GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.897.0GSM372989genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.897.0GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.796.9GSM373005genotype: 11542 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.396.4GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-136Contig6483_atContig6483--3e-1At2g23920unknown proteinC.G.S.X.
0.015e-136Contig14846_atContig14846--1e-17At1g07510ftsh10 (FtsH protease 10)C.G.S.X.
0.015e-136Contig2523_atContig2523--4e-93At1g07770RPS15A (ribosomal protein s15a)C.G.S.X.
0.015e-136Contig2083_s_atContig2083photosystem-I PSI-F subunit precursor-6e-7At1g31330PSAF (photosystem I subunit F)C.G.S.X.
0.015e-136HM03H03u_atHM03H03u--3e-1At2g23920unknown proteinC.G.S.X.
0.025e-136Contig25169_atContig25169--4e+0At4g32590ferredoxin-relatedC.G.S.X.
0.015e-136Contig13741_atContig13741--3e-61At5g63890ATHDH (HISTIDINOL DEHYDROGENASE)C.G.S.X.
0.015e-136Contig6483_s_atContig6483--3e-1At2g23920unknown proteinC.G.S.X.
0.015e-136Contig5755_atContig5755--2e-1At4g17520nuclear RNA-binding protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.402e-45184Arabidopsis thalianaAt5g16070831464chaperonin, putativeF:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:cellular_component unknown;BOMFPA---C.G.S.X.
0.192e-30135Glycine maxGmaAffx.84803.1.S1_atBU761560--2e-60At5g16070chaperonin, putativeC.G.S.X.
0.6701415Oryza sativaOs05g0147400AK062146.1-T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1)6e-67At5g16070chaperonin, putativeC.G.S.X.
0.416e-46186Populus trichocarpaPtpAffx.215448.1.S1_atpmrna29650hypothetical protein-0At3g02530chaperonin, putativeC.G.S.X.
0.8702793Triticum aestivumTa.6733.2.S1_x_atCD888689--2e-35At5g16070chaperonin, putativeC.G.S.X.
0.201e-37157Vitis vinifera1615908_atCF214075hypothetical protein LOC100249757-9e-88At3g02530chaperonin, putativeC.G.S.X.
0.6601366Zea maysZm.6782.1.A1_atCF061901hypothetical protein LOC100193477-5e-92At5g16070chaperonin, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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