Gene omics information

Query gene ID Contig3898_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig3898_atContig3898--1e-7At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)S.X.H.G.
0.7187.1Contig22324_atContig22324--3e-1At1g31812ACBP6 (acyl-CoA-binding protein 6)S.X.H.G.
0.6077.3Contig17737_atContig17737--2e+0At3g51636unknown proteinS.X.H.G.
0.5572.0Contig15658_atContig15658--1e+0At2g22860ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)S.X.H.G.
0.4458.9rbah55a21_s_atrbah55a21--4e+0At5g26840unknown proteinS.X.H.G.
0.1514.1Contig21217_atContig21217--2e+0At5g64810WRKY51S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.198.7GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.198.7GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.398.1GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.198.0GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.997.9GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.697.7GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.397.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.097.2GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.097.2GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.897.0GSM261075Albina e-16 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8001310Contig3899_atContig3899--6e-10At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.187e-60230Contig12988_atContig12988--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.171e-33143Contig12989_x_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.171e-33143Contig12989_atContig12989--5e-1At5g55970zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.044e-652Contig20760_atContig20760--4e-1At5g57887unknown proteinC.G.S.X.
0.036e-548Contig13214_atContig13214--1e-1At3g07260forkhead-associated domain-containing protein / FHA domain-containing proteinC.G.S.X.
0.024e-342Contig12394_atContig12394--1e+1At5g35110unknown proteinC.G.S.X.
0.021e-240Contig6370_atContig6370--9e-9At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeC.G.S.X.
0.021e-240Contig9835_atContig9835--2e-3At2g35360ubiquitin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-757Arabidopsis thalianaAt3g13200820510EMB2769 (EMBRYO DEFECTIVE 2769)F:molecular_function unknown;P:nuclear mRNA splicing, via spliceosome;C:spliceosome;MOFPBVA---C.G.S.X.
0.182e-1997Glycine maxGma.2337.2.S1_a_atAW756331--1e-22At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.610652Oryza sativaOs06g0106100AK112060.1-Cwf15/Cwc15 cell cycle control protein familyprotein6e-10At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.122e-1377Populus trichocarpaPtpAffx.20105.1.S1_atCV267754hypothetical protein-1e-30At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.525e-118424Triticum aestivumTa.26370.1.A1_atCD491128--3e-8At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.092e-1375Vitis vinifera1616011_atCB349137hypothetical protein LOC100260003-9e-28At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.574e-175613Zea maysZm.2245.1.A1_atCF625725pre-mRNA-splicing factor cwc15-6e-7At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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