Gene omics information

Query gene ID Contig3855_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5268.3Contig3855_atContig3855--6e-2At2g21100disease resistance-responsive protein-related / dirigent protein-relatedS.X.H.G.
0.3849.5Contig16370_atContig16370--3e-8At5g45740unknown proteinS.X.H.G.
0.3849.5HM04D16u_s_atHM04D16u--3e+0At5g10400histone H3S.X.H.G.
0.3138.6Contig20590_atContig20590--1e+0At3g52520unknown proteinS.X.H.G.
0.3138.6Contig19751_atContig19751--5e+0At3g03610phagocytosis and cell motility protein ELMO1-relatedS.X.H.G.
0.1919.6Contig9099_atContig9099--3e-3At4g26080ABI1 (ABA INSENSITIVE 1)S.X.H.G.
0.1919.6Contig2202_atContig2202--2e-10At5g18410PIR121S.X.H.G.
0.097.4Contig8565_atContig8565--7e-10At3g13224RNA recognition motif (RRM)-containing proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.199.9GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
40.799.9GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
31.599.9GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
27.899.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
24.499.8GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
18.099.7GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
17.299.6GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
16.499.6GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grains
12.999.4GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
10.099.1GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-238Contig228_s_atContig228--2e+0At2g39805integral membrane Yip1 family proteinC.G.S.X.
0.013e-238Contig14569_atContig14569--3e-7At3g13560glycosyl hydrolase family 17 proteinC.G.S.X.
0.021e-136Contig15964_atContig15964--1e-5At4g33020ZIP9C.G.S.X.
0.021e-136Contig4225_atContig4225--7e-4At5g54430universal stress protein (USP) family proteinC.G.S.X.
0.034e-134Contig2609_atContig2609--4e-20At1g58380XW6C.G.S.X.
0.034e-134Contig11558_atContig11558--1e+0At1g33270patatin-relatedC.G.S.X.
0.034e-134Contig11166_s_atContig11166--8e-2At1g65000unknown proteinC.G.S.X.
0.024e-134Contig2738_s_atContig2738--2e-1At4g27820BGLU9 (BETA GLUCOSIDASE 9)C.G.S.X.
0.024e-134Contig619_atContig619--8e-10At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.046e-238Arabidopsis thalianaAt2g21100816645disease resistance-responsive protein-related / dirigent protein-relatedF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P---C.G.S.X.
0.031e+034Glycine maxPsAffx.CL1458Contig1_s_atPsAffx.CL1458Contig1--1e+0At1g05450protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedC.G.S.X.
0.193e-859Oryza sativaOs.8897.1.S1_at---0C.G.S.X.
0.035e+032Populus trichocarpaPtpAffx.10663.1.A1_a_atCV254045--2e-2At5g57040lactoylglutathione lyase family protein / glyoxalase I family proteinC.G.S.X.
0.051e+034Triticum aestivumTaAffx.5244.1.S1_atCA717976--7e-1At1g07660histone H4C.G.S.X.
0.054e+030Vitis vinifera1617009_atCF202370.1hypothetical protein LOC100245566-9e-1At4g30410transcription factorC.G.S.X.
0.044e-134Zea maysZm.2318.1.A1_atBM074442--9e-1At1g23710unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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