Gene omics information

Query gene ID Contig3806_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6380.3Contig3806_s_atContig3806--1e-3At2g43710SSI2S.X.H.G.
0.7589.5Contig10037_atContig10037--9e-1At5g23760heavy-metal-associated domain-containing proteinS.X.H.G.
0.7388.7Contig12375_atContig12375--1e-4At3g28940avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putativeS.X.H.G.
0.6077.3Contig6337_atContig6337--2e+0At3g10640VPS60.1S.X.H.G.
0.5369.7Contig9509_atContig9509--7e-1At3g23980unknown proteinS.X.H.G.
0.5066.9Contig6082_atContig6082--2e+0At3g52760integral membrane Yip1 family proteinS.X.H.G.
0.5066.9Contig2821_atContig2821--1e-72At3g116302-cys peroxiredoxin, chloroplast (BAS1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.398.1GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
4.596.7GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.296.3GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.296.3GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
4.296.3GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
4.296.3GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stress
4.096.0GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
4.096.0GSM440963Control palea_Rep1GSE17669Gene expression in the barley spike during drought stress
3.995.8GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stress
3.695.3GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-446Contig6805_atContig6805--1e-9At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
0.023e+032Contig13587_s_atContig13587--6e-10At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)C.G.S.X.
0.033e+032HVSMEl0013J10r2_atHVSMEl0013J10r2--7e-2At5g25940early nodulin-relatedC.G.S.X.
0.033e+032HB09A04w_s_atHB09A04w--3e+0At3g50630KRP2 (KIP-RELATED PROTEIN 2)C.G.S.X.
0.023e+032Contig17924_atContig17924--2e+0At5g55570unknown proteinC.G.S.X.
0.023e+032Contig13587_atContig13587--6e-10At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)C.G.S.X.
0.023e+032Contig1815_atContig1815--1e-11At1g61520LHCA3C.G.S.X.
0.013e+032Contig1735_s_atContig1735--1e+0At3g22400LOX5C.G.S.X.
0.023e+032Contig18_s_atContig18--8e-2At5g25940early nodulin-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-344Arabidopsis thalianaAt2g43710818973SSI2Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling.---C.G.S.X.
0.035e-136Glycine maxGmaAffx.50020.1.A1_atBG550700--3e+0At4g17486unknown proteinC.G.S.X.
0.205e-48192Oryza sativaOs01g0919900AK103568.1-Acyl-[acyl-carrier-protein] desaturase,chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACPdesaturase) (Delta(9) stearoyl-acyl carrier proteindesaturase)2e-54At2g43710SSI2C.G.S.X.
0.035e-136Populus trichocarpaPtpAffx.220422.1.S1_atpmrna36810--1e+0At5g01520zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.655e-59228Triticum aestivumTa.28344.1.A1_x_atCA722231--4e+0At1g42980formin homology 2 domain-containing protein / FH2 domain-containing proteinC.G.S.X.
0.056e+030Vitis vinifera1608296_atBQ799613hypothetical protein LOC100242444-3e-127At2g43710SSI2C.G.S.X.
0.345e-60230Zea maysZm.4015.2.A1_atCD435491hypothetical protein LOC100192652-2e-15At3g02630acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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