Gene omics information

Query gene ID Contig3707_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3707_s_atContig3707--1e-23At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.6784.7Contig2761_atContig2761--2e+0At5g40550unknown proteinS.X.H.G.
0.6178.7Contig3527_atContig3527--4e-169At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.2935.5Contig4358_atContig4358--7e-5At5g61500ATG3S.X.H.G.
0.2326.1Contig943_atContig943--1e-1At1g68945unknown proteinS.X.H.G.
0.1919.6Contig7551_atContig7551--2e-25At3g10640VPS60.1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.695.3GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stress
3.595.1GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
3.595.1GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
3.294.3GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
3.294.3GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
3.294.3GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
3.294.3GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stress
3.194.1GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
3.194.1GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stress
3.093.8GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9902591Contig3707_atContig3707--1e-23At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.081e-963Contig6815_atContig6815--6e-11At3g06170TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.028e-238Contig26206_atContig26206--7e-2At4g21620glycine-rich proteinC.G.S.X.
0.018e-238Contig12291_atContig12291--5e-2At1g18860WRKY61C.G.S.X.
0.013e-136Contig9812_atContig9812--5e-11At2g25530AFG1-like ATPase family proteinC.G.S.X.
0.013e-136Contig5599_atContig5599--6e-1At1g16640transcriptional factor B3 family proteinC.G.S.X.
0.023e-136Contig5597_s_atContig5597--4e+0At5g54095unknown proteinC.G.S.X.
0.023e-136Contig2470_s_atContig2470--1e-1At4g16380metal ion bindingC.G.S.X.
0.021e+034Contig18534_atContig18534--8e-1At2g33775RALFL19 (ralf-like 19)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.271e-23111Arabidopsis thalianaAt1g16180838187TMS membrane family protein / tumour differentially expressed (TDE) family proteinF:molecular_function unknown;P:unknown;C:endomembrane system, membrane;MFPO---C.G.S.X.
0.087e-1479Glycine maxGmaAffx.66328.1.S1_atAW277770--3e-13At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.5801011Oryza sativaOs02g0792900AK068367.1-TMS membrane protein/tumour differentiallyexpressed protein family protein1e-15At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.295e-24113Populus trichocarpaPtpAffx.1257.1.S1_a_atCF228330hypothetical protein-3e-65At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.7101528Triticum aestivumTa.906.1.S1_atCK195658--3e-22At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.212e-32139Vitis vinifera1611216_atCB912018hypothetical protein LOC100262087-4e-126At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
0.5601007Zea maysZm.747.1.A1_atCF627612hypothetical protein LOC100191588-3e-22At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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