Gene omics information

Query gene ID Contig3675_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9599.2Contig3675_atContig3675--2e-10At3g55500ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)S.X.H.G.
0.7187.1Contig14763_atContig14763--2e-1At2g37510RNA-binding protein, putativeS.X.H.G.
0.6985.5Contig23732_atContig23732--6e-1At1g05190emb2394 (embryo defective 2394)S.X.H.G.
0.6784.7Contig24497_atContig24497--3e+0At5g36910THI2.2 (THIONIN 2.2)S.X.H.G.
0.6784.7Contig20936_atContig20936--3e-5At3g21175ZML1 (ZIM-LIKE 1)S.X.H.G.
0.6581.4HM01F24T_s_atHM01F24T--4e-5At2g3337060S ribosomal protein L23 (RPL23B)S.X.H.G.
0.6279.1Contig22905_atContig22905--4e-1At2g3448060S ribosomal protein L18A (RPL18aB)S.X.H.G.
0.6178.7Contig2738_s_atContig2738--2e-1At4g27820BGLU9 (BETA GLUCOSIDASE 9)S.X.H.G.
0.6178.7Contig19492_atContig19492--5e-1At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)S.X.H.G.
0.5874.9Contig26480_atContig26480--2e+0At1g62070unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.299.8GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
16.899.6GSM16082319% SWC rep1GSE6990Barley drought stress
14.599.5GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
13.299.4GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
12.599.4GSM16082619% SWC rep3GSE6990Barley drought stress
12.599.4GSM16082238% SWC rep3GSE6990Barley drought stress
10.399.1GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
10.199.1GSM161221cold treatment rep3GSE6993Barley low temperature stress
9.299.0GSM16081938% SWC rep1GSE6990Barley drought stress
9.198.9GSM160464drought control rep1GSE6990Barley drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.452e-119428Contig3674_atContig3674--1e-14At2g37640EXP3C.G.S.X.
0.298e-42171Contig7055_atContig7055--1e-5At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)C.G.S.X.
0.288e-36151Contig3676_atContig3676--9e-6At2g37640EXP3C.G.S.X.
0.232e-1789Contig16079_atContig16079--1e-4At2g37640EXP3C.G.S.X.
0.085e-652Contig18422_atContig18422--1e-1At5g42900unknown proteinC.G.S.X.
0.055e-342Contig11609_atContig11609--7e-1At1g56320unknown proteinC.G.S.X.
0.013e-136Contig1237_s_atContig1237aquaporin-1e-30At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)C.G.S.X.
0.023e-136Contig14883_atContig14883--2e+0At5g07840ankyrin repeat family proteinC.G.S.X.
0.023e-136Contig11653_s_atContig11653--8e+0At4g40011unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.182e-1067Arabidopsis thalianaAt3g55500824715ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.---C.G.S.X.
0.202e-757Glycine maxGmaAffx.93176.1.S1_s_atCF808901expansin-2e-24At2g28950ATEXPA6 (ARABIDOPSIS THALIANA EXPANSIN A6)C.G.S.X.
0.563e-171603Oryza sativaOs01g0823100U30477.1-Alpha-expansin OsEXPA25e-5At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)C.G.S.X.
0.192e-861Populus trichocarpaPtpAffx.206351.1.S1_atpmrna12606hypothetical protein-2e-12At1g26770ATEXPA10 (ARABIDOPSIS THALIANA EXPANSIN A 10)C.G.S.X.
0.8201235Triticum aestivumTa.5567.1.S1_atAY543529.1expansin EXPA3-3e-18At2g37640EXP3C.G.S.X.
0.162e-26119Vitis vinifera1619010_s_atBQ794765similar to expansin-4e-11At2g40610ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)C.G.S.X.
0.527e-153539Zea maysZm.665.1.S1_atAF332169.1alpha expansin1-7e-13At2g37640EXP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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