Gene omics information

Query gene ID Contig3603_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8394.0Contig3603_atContig3603--2e-15At3g25400-S.X.H.G.
0.9198.1Contig17523_atContig17523--7e-2At4g08230glycine-rich proteinS.X.H.G.
0.9198.1Contig4591_atContig4591--4e-2At4g22890PGR5-LIKE AS.X.H.G.
0.9198.1Contig17513_atContig17513--4e-4At5g06600UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)S.X.H.G.
0.7790.8HZ49P22r_s_atHZ49P22r--9e-1At5g42825unknown proteinS.X.H.G.
0.7187.1Contig9703_atContig9703--3e+0At2g37200integral membrane protein, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.999.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
16.799.6GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
13.999.5GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
10.399.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.299.1GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
9.599.0GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.998.9GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
8.998.9GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stress
8.298.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.997.9GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-1891Contig3605_atContig3605--3e+0At3g55570unknown proteinC.G.S.X.
0.052e-1479HT02G11r_atHT02G11r--2e+1At5g10780-C.G.S.X.
0.062e-1479HVSMEk0020A14r2_atHVSMEk0020A14r2--3e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeC.G.S.X.
0.032e-136Contig17965_atContig17965--2e-17At3g15352ATCOX17C.G.S.X.
0.029e-134Contig2859_x_atContig2859--3e-11At1g08380PSAO (photosystem I subunit O)C.G.S.X.
0.029e-134Contig2859_s_atContig2859--3e-11At1g08380PSAO (photosystem I subunit O)C.G.S.X.
0.019e-134Contig4729_atContig4729--2e-30At1g15500ATNTT2C.G.S.X.
0.029e-134Contig2859_atContig2859--3e-11At1g08380PSAO (photosystem I subunit O)C.G.S.X.
0.029e-134Contig1432_atContig1432--4e+0At1g80340GA3OX2 (GIBBERELLIN 3-OXIDASE 2)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.162e-1583Arabidopsis thalianaAt3g25400822124-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPAF---C.G.S.X.
0.141e-20101Glycine maxGmaAffx.82550.1.S1_atBM091647--3e-19At3g25400-C.G.S.X.
0.302e-63244Oryza sativaOs02g0479300AB110198.1-Pyrophosphohydrolase MazG RS21-C6 family protein2e-2At3g25400-C.G.S.X.
0.093e-963Populus trichocarpaPtpAffx.208202.1.S1_atpmrna16319hypothetical protein-9e-21At3g25400-C.G.S.X.
0.664e-168591Triticum aestivumTaAffx.89098.1.S1_atCA605930--3e-14At3g25400-C.G.S.X.
0.144e-1477Vitis vinifera1620898_atCB976503hypothetical protein LOC100266931-2e-2At3g25400-C.G.S.X.
0.245e-39161Zea maysZm.18112.1.A1_atCF627231mazG nucleotide pyrophosphohydrolase domain protein-3e-1At4g36890IRX14 (irregular xylem 14)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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