Gene omics information

Query gene ID Contig3576_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig3576_atContig3576--1e-8At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)S.X.H.G.
0.5674.3Contig4674_atContig4674--5e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)S.X.H.G.
0.4661.0Contig18939_atContig18939--3e-2At4g35700zinc finger (C2H2 type) family proteinS.X.H.G.
0.4053.1rbaal33b21_s_atrbaal33b21--7e+0At5g24155squalene monooxygenase, putative / squalene epoxidase, putativeS.X.H.G.
0.3647.1Contig5523_atContig5523--4e-8At5g10480PAS2 (PASTICCINO 2)S.X.H.G.
0.2224.2Contig18407_atContig18407--2e+0At3g50450HR1 (HOMOLOG OF RPW8 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
88.4100.0GSM311256hsp5_without_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
75.2100.0GSM311257hsp5_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
67.2100.0GSM311255hsp5_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
57.1100.0GSM311253hsp5_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
41.499.9GSM311254hsp5_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
39.599.9GSM311258hsp5_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
5.697.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.596.7GSM282028Malting_day1_Merit_rep1GSE11200Expression data from malting barley seeds
3.795.5GSM282024Malting_day4_Merit_rep2GSE11200Expression data from malting barley seeds
3.795.5GSM282023Malting_day4_Merit_rep3GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.490803Contig3578_atContig3578--6e+0At1g15757-C.G.S.X.
0.432e-165581Contig3574_s_atContig3574--4e+0At1g15757-C.G.S.X.
0.482e-91335Contig4174_atContig4174--6e-1At4g01700chitinase, putativeC.G.S.X.
0.459e-85313Contig16814_atContig16814--6e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.516e-46184Contig7001_atContig7001--2e-1At1g02360chitinase, putativeC.G.S.X.
0.391e-43176Contig2519_x_atContig2519--9e-9At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.391e-43176Contig2517_s_atContig2517--2e-6At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.293e-35149Contig25195_atContig25195--5e+0At5g16170unknown proteinC.G.S.X.
0.191e-34147HV_CEa0009O11f2_x_atHV_CEa0009O11f2--2e+0At1g15757-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.091e-861Arabidopsis thalianaAt3g12500820429ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.---C.G.S.X.
0.072e-552Glycine maxGmaAffx.29692.2.S1_atAI437572--8e-1At1g24260SEP3 (SEPALLATA3)C.G.S.X.
0.515e-71270Oryza sativaOs05g0399400L37289.1-Chitinase (EC 3.2.1.14)4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.051e-242Populus trichocarpaPtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.7301302Triticum aestivumTa.2783.1.S1_atAB029935.1chitinase 2-2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.043e+032Vitis vinifera1620505_atZ54234.1chitinase class I-2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.299e-2097Zea maysZm.11654.1.A1_atCK347373hypothetical protein LOC100280135-1e-5At3g54420ATEP3C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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