Gene omics information

Query gene ID Contig3527_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7589.5Contig3527_atContig3527--4e-169At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.5774.9Contig3707_s_atContig3707--1e-23At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinS.X.H.G.
0.4458.9Contig2761_atContig2761--2e+0At5g40550unknown proteinS.X.H.G.
0.4053.1Contig5782_atContig5782--9e-3At5g63740zinc finger protein-relatedS.X.H.G.
0.4053.1Contig4899_s_atContig4899--2e-2At2g01140fructose-bisphosphate aldolase, putativeS.X.H.G.
0.4053.1Contig6931_atContig6931--8e-1At2g04480unknown proteinS.X.H.G.
0.2326.1Contig16318_atContig16318--7e-2At3g56790RNA splicing factor-relatedS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.499.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
19.099.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.899.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.897.0GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
4.596.7GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
4.496.6GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
4.496.6GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
3.695.3GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
3.695.3GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
2.893.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.6901174Contig3528_atContig3528--5e-119At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.032e-344Contig3020_atContig3020--5e-107At2g2014026S protease regulatory complex subunit 4, putativeC.G.S.X.
0.022e-240Contig1657_atContig1657--3e-136At1g53750RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)C.G.S.X.
0.014e-136Contig191_s_atContig191--7e-6At2g33740CUTAC.G.S.X.
0.014e-136Contig191_atContig191--7e-6At2g33740CUTAC.G.S.X.
0.012e+034Contig15377_atContig15377--6e-19At2g34140Dof-type zinc finger domain-containing proteinC.G.S.X.
0.022e+034Contig25984_atContig25984--9e-1At4g24380unknown proteinC.G.S.X.
0.012e+034Contig9451_atContig9451--8e-2At2g27350OTU-like cysteine protease family proteinC.G.S.X.
0.022e+034HVSMEn0004B15r2_atHVSMEn0004B15r2--1e+1At5g14570ATNRT2.7 (Arabidopsis thaliana high affinity nitrate transporter 2.7)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.674e-169595Arabidopsis thalianaAt5g19990832121RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)26S proteasome AAA-ATPase subunit---C.G.S.X.
0.529e-134478Glycine maxGma.11232.1.S1_s_atBI943460--0At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.6801546Oryza sativaOs02g0205300AB033537.1-26S proteasome subunit 8 (Tat binding protein)5e-169At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.492e-82307Populus trichocarpaPtp.6509.1.S1_atCF236682hypothetical protein-1e-171At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.8502417Triticum aestivumTa.28732.1.S1_a_atCA634142--6e-144At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.512e-146517Vitis vinifera1614631_atCB979660hypothetical protein LOC100254376-1e-137At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
0.6801421Zea maysZm.5322.1.A1_a_atAY103724.1hypothetical protein LOC100273032 /// hypothetical protein LOC100274445-9e-152At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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