Gene omics information

Query gene ID Contig3366_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5774.9Contig3366_atContig3366--6e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)S.X.H.G.
0.8394.0Contig12524_atContig12524--5e-1At1g05310pectinesterase family proteinS.X.H.G.
0.7790.8Contig7176_atContig7176--3e-7At5g01770RAPTOR2 (RAPTOR2)S.X.H.G.
0.6784.7Contig7354_atContig7354--9e-17At4g05020NDB2 (NAD(P)H dehydrogenase B2)S.X.H.G.
0.5774.9Contig14390_atContig14390--3e-11At1g26830ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3)S.X.H.G.
0.5369.7Contig6745_atContig6745--3e+0At5g28950unknown proteinS.X.H.G.
0.3545.1Contig14080_atContig14080--4e-9At2g21120unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
67.2100.0GSM238416Endosperm 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
58.9100.0GSM238417Endosperm 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
50.599.9GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.099.8GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
22.099.8GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stress
21.199.7GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
21.199.7GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stress
17.499.6GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
17.299.6GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
17.299.6GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.655e-151533Contig3371_atContig3371--6e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.756e-135480Contig3369_s_atContig3369--2e-3At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.612e-113408Contig3372_s_atContig3372--6e-2At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.334e-25115S0001100113B11F2_x_atS0001100113B11F2--2e-1At4g32940GAMMA-VPE (GAMMA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.027e-238Contig4212_s_atContig4212--3e+0At5g03990unknown proteinC.G.S.X.
0.017e-238Contig4211_atContig4211--1e-12At3g51860CAX3 (CATION EXCHANGER 3)C.G.S.X.
0.013e-136Contig6416_s_atContig6416--5e-2At4g02790GTP-binding family proteinC.G.S.X.
0.021e+034EBem05_SQ004_B02_atEBem05_SQ004_B02--1e+0At1g03250unknown proteinC.G.S.X.
0.021e+034Contig16462_atContig16462--2e+0At5g14910heavy-metal-associated domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.096e-756Arabidopsis thalianaAt1g62710842569BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.---C.G.S.X.
0.121e-1585Glycine maxGma.968.1.S1_atD28876.1cysteine proteinase-9e-38At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.505e-111402Oryza sativaOs04g0537900AK103573.1-C13 endopeptidase NP1 (Fragment)1e-6At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.076e-1169Populus trichocarpaPtpAffx.203177.1.S1_x_atpmrna6297hypothetical protein-5e-27At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.7701540Triticum aestivumTa.6205.1.S1_atCD895236--8e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.063e-652Vitis vinifera1610616_atCB921212hypothetical protein LOC100260773 /// hypothetical protein LOC100252365-5e-3At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
0.510660Zea maysZm.12714.1.S1_atAY106221.1vacuolar processing enzyme, beta-isozyme-3e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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