Gene omics information

Query gene ID Contig3337_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8092.5Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.8092.5Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8092.5Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.6380.3Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.2528.9Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.099.8GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
23.399.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
17.099.6GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
16.599.6GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.799.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
12.399.4GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.498.5GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.597.6GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.397.4GSM146366Maythorpe Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.296.3GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001752Contig3337_s_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.6601072HI01O12w_atHI01O12w--3e-29At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.511e-178624Contig3334_atContig3334--2e-53At3g53610ATRAB8C.G.S.X.
0.516e-116416Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.046e-857Contig2537_atContig2537--1e-29At3g11730ATFP8C.G.S.X.
0.062e-756Contig3169_atContig3169--2e-13At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)C.G.S.X.
0.042e-756Contig2393_atContig2393--9e-31At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.052e-756Contig2377_s_atContig2377--1e-29At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.044e-652Contig3634_atContig3634--3e-46At5g47200ATRAB1AC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.535e-50198Arabidopsis thalianaAt5g59840836105Ras-related GTP-binding family proteinF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA---C.G.S.X.
0.536e-66252Glycine maxGmaAffx.91170.1.S1_x_atCF806895--5e-58At3g46060ATRAB8AC.G.S.X.
0.603e-62240Oryza sativaOs.12233.2.S1_x_at---0C.G.S.X.
0.457e-90331Populus trichocarpaPtpAffx.14585.3.S1_atBU893135hypothetical protein-2e-133At3g46060ATRAB8AC.G.S.X.
0.7901310Triticum aestivumTa.6968.1.S1_atCK196001--1e-45At3g53610ATRAB8C.G.S.X.
0.445e-69260Vitis vinifera1620541_atCF212449hypothetical protein LOC100257177-5e-75At3g53610ATRAB8C.G.S.X.
0.442e-100365Zea maysZm.6039.1.A1_atBG837895--9e-65At5g03520ATRAB8CC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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