Gene omics information

Query gene ID Contig3335_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.9198.1Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.8394.0Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.8092.5Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.6380.3Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.3647.1HA06i14r_s_atHA06i14r--8e-4At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.699.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
11.699.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.998.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.397.4GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.196.2GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.995.8GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.995.8GSM146360Golden Promise Root Salt, biological rep 1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.895.7GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.895.7GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
3.695.3GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.517e-116416Contig3337_s_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.517e-116416Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.423e-93341Contig3334_atContig3334--2e-53At3g53610ATRAB8C.G.S.X.
0.361e-52206HI01O12w_atHI01O12w--3e-29At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.037e-857Contig2537_atContig2537--1e-29At3g11730ATFP8C.G.S.X.
0.043e-756Contig3169_atContig3169--2e-13At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)C.G.S.X.
0.031e-654Contig2393_atContig2393--9e-31At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.031e-654Contig2377_s_atContig2377--1e-29At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.042e-550Contig2536_atContig2536--5e-1At2g32360ubiquitin family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.483e-67256Arabidopsis thalianaAt5g59840836105Ras-related GTP-binding family proteinF:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA---C.G.S.X.
0.477e-32139Glycine maxGmaAffx.91170.1.S1_x_atCF806895--5e-58At3g46060ATRAB8AC.G.S.X.
0.540726Oryza sativaOs03g0819900AY576526.1-Ethylene-responsive small GTP-binding protein4e-82At3g09900ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)C.G.S.X.
0.412e-41171Populus trichocarpaPtp.2072.2.S1_s_atCA931719hypothetical protein-6e-83At3g46060ATRAB8AC.G.S.X.
0.422e-108393Triticum aestivumTa.6968.1.S1_atCK196001--1e-45At3g53610ATRAB8C.G.S.X.
0.411e-69262Vitis vinifera1620541_atCF212449hypothetical protein LOC100257177-5e-75At3g53610ATRAB8C.G.S.X.
0.434e-148523Zea maysZm.2593.1.S1_atCA403212ras-related protein ARA-3-5e-54At5g59840Ras-related GTP-binding family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage