Gene omics information

Query gene ID Contig3334_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.9198.1Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8394.0Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.8092.5Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.6380.3Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.3647.1HA06i14r_s_atHA06i14r--8e-4At5g15650RGP2 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.998.3GSM382237Root_Control3GSE15295Mercury toxicity in barley roots
6.598.2GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.897.0GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
4.796.9GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
4.696.8GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
4.396.4GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.196.2GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.895.7GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.795.5GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.795.5GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.512e-178624Contig3337_s_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.512e-178624Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.372e-113408HI01O12w_atHI01O12w--3e-29At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.424e-93341Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinC.G.S.X.
0.032e-550Contig2537_atContig2537--1e-29At3g11730ATFP8C.G.S.X.
0.057e-548Contig3169_atContig3169--2e-13At1g16920ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B)C.G.S.X.
0.047e-548Contig2393_atContig2393--9e-31At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.047e-548Contig2377_s_atContig2377--1e-29At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)C.G.S.X.
0.035e-342Contig2536_atContig2536--5e-1At2g32360ubiquitin family proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.462e-53210Arabidopsis thalianaAt3g53610824529ATRAB8GTPase AtRAB8 (atrab8)---C.G.S.X.
0.472e-81303Glycine maxGmaAffx.91170.1.S1_x_atCF806895--5e-58At3g46060ATRAB8AC.G.S.X.
0.580781Oryza sativaOs05g0461300AK111917.1-Ras-related protein Rab-8A (Oncogene c-mel)4e-48At3g53610ATRAB8C.G.S.X.
0.382e-66254Populus trichocarpaPtpAffx.12284.1.A1_s_atCV236490hypothetical protein-6e-81At3g46060ATRAB8AC.G.S.X.
0.7601562Triticum aestivumTa.23107.1.S1_a_atCK156982--1e-51At3g53610ATRAB8C.G.S.X.
0.364e-64244Vitis vinifera1620541_atCF212449hypothetical protein LOC100257177-5e-75At3g53610ATRAB8C.G.S.X.
0.424e-157553Zea maysZm.2826.1.S1_atBM333443hypothetical protein LOC100192989-2e-62At3g46060ATRAB8AC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage