Gene omics information

Query gene ID Contig3332_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3332_atContig3332--2e-1At3g21215RNA-binding protein, putativeS.X.H.G.
0.8394.0Contig3334_atContig3334--2e-53At3g53610ATRAB8S.X.H.G.
0.8394.0Contig3335_atContig3335--3e-67At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.8394.0Contig3337_atContig3337--5e-50At5g59840Ras-related GTP-binding family proteinS.X.H.G.
0.6380.3Contig16423_atContig16423--2e+0At3g02580STE1 (STEROL 1)S.X.H.G.
0.4458.9Contig6860_atContig6860--8e-4At5g66815unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.199.3GSM130803JA, biological rep1GSE5605Expression data from barley under salinity stress and JA treatment
11.199.2GSM419978Awn_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
11.199.2GSM440969Control awn_Rep1GSE17669Gene expression in the barley spike during drought stress
9.899.1GSM311253hsp5_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
9.499.0GSM71150OWB-R unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
9.499.0GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expression
9.198.9GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spike
9.198.9GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stress
8.998.9GSM419980Awn_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
8.998.9GSM440971Control awn_Rep3GSE17669Gene expression in the barley spike during drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.512e-123442Contig13623_atContig13623--2e-10At5g18280ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)C.G.S.X.
0.223e-29129HW09M17u_atHW09M17u--4e+0At5g14660PDF1B (PEPTIDE DEFORMYLASE 1B)C.G.S.X.
0.001e-138Contig21662_atContig21662--1e+0At5g11160APT5 (Adenine phosphoribosyltransferase 5)C.G.S.X.
0.021e-138Contig13586_atContig13586--1e+0At4g30660hydrophobic protein, putative / low temperature and salt responsive protein, putativeC.G.S.X.
0.011e-138Contig8066_s_atContig8066--3e-10At1g752105' nucleotidase family proteinC.G.S.X.
0.011e-138Contig7873_atContig7873--1e-1At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)C.G.S.X.
0.011e-138Contig6582_atContig6582--2e+0At4g16240unknown proteinC.G.S.X.
0.024e-136rbaak19o02_s_atrbaak19o02--1e+0At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.014e-136Contig8797_atContig8797--1e-2At4g09080TOC75-IVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.012e-138Arabidopsis thalianaAt3g21215821675RNA-binding protein, putativeF:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:unknown;PMFOVBA---C.G.S.X.
0.033e-448Glycine maxGmaAffx.83700.1.S1_atBU965231--2e-1At4g29980unknown proteinC.G.S.X.
0.404e-38161Oryza sativaOs11g01264009639.m00234-Nucleoside phosphatase GDA1/CD39 family protein2e-1At5g18280ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)C.G.S.X.
0.027e-240Populus trichocarpaPtpAffx.218102.1.S1_atpmrna33625hypothetical protein-2e+1At5g45870Bet v I allergen family proteinC.G.S.X.
0.6601094Triticum aestivumTa.27744.1.S1_x_atCA610821--4e+0At5g18280ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2)C.G.S.X.
0.022e-136Vitis vinifera1606982_atCF609391--2e-5At3g20320TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2)C.G.S.X.
0.044e-446Zea maysZm.3706.1.S1_atCO526030hypothetical protein LOC100272244-2e-1At3g04080ATAPY1 (APYRASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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