Gene omics information

Query gene ID Contig3221_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6784.7Contig3221_atContig3221--2e-5At5g64040PSANS.X.H.G.
0.6784.7Contig4756_atContig4756--2e-75At2g24270ALDH11A3S.X.H.G.
0.6178.7Contig13986_atContig13986--4e-33At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)S.X.H.G.
0.5774.9Contig3257_atContig3257--2e+0At3g51030ATTRX1S.X.H.G.
0.5066.9HY10H19u_s_atHY10H19u--5e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.2326.1HY08C12u_atHY08C12u--3e+0At5g23640unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.897.8GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
5.597.6GSM31120528-4_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
5.397.4GSM310863lina_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.997.1GSM311259kara_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.997.1GSM310864lina_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.897.0GSM311261kara_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.897.0GSM311265kara_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.796.9GSM311258hsp5_without_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.796.9GSM31125128-4_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
4.696.8GSM311260kara_with_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.481e-94345HVSMEh0080N02r2_atHVSMEh0080N02r2--8e-3At5g64040PSANC.G.S.X.
0.388e-93339EBpi01_SQ005_G20_x_atEBpi01_SQ005_G20--6e-3At5g64040PSANC.G.S.X.
0.372e-69262HVSMEi0005B04r2_x_atHVSMEi0005B04r2--2e-5At5g64040PSANC.G.S.X.
0.222e-44178baak1f24_atbaak1f24--1e+0At1g11200unknown proteinC.G.S.X.
0.023e-342Contig13494_atContig13494--1e-2At5g49890CLC-C (CHLORIDE CHANNEL C)C.G.S.X.
0.024e-238Contig3365_atContig3365--2e-85At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)C.G.S.X.
0.024e-238Contig7256_atContig7256--4e-8At1g52870peroxisomal membrane protein-relatedC.G.S.X.
0.022e-136Contig10661_atContig10661--2e+0At3g15680zinc finger (Ran-binding) family proteinC.G.S.X.
0.012e-136Contig10443_atContig10443--8e-14At5g09880RNA recognition motif (RRM)-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.172e-550Arabidopsis thalianaAt5g64040836525PSANEncodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.---C.G.S.X.
0.213e-240Glycine maxGma.4613.5.A1_x_atCD412100--1e-38At5g64040PSANC.G.S.X.
0.396e-103375Oryza sativaOs12g0189400AK059037.1-Photosystem I reaction centre subunit N,chloroplast precursor (PSI- N)8e-15At5g64040PSANC.G.S.X.
0.215e-756Populus trichocarpaPtp.4200.1.S1_s_atCV278991hypothetical protein-3e-73At5g64040PSANC.G.S.X.
0.561e-145515Triticum aestivumTa.28363.2.S1_a_atBE217056--1e-4At5g64040PSANC.G.S.X.
0.222e-1271Vitis vinifera1622534_atBQ799942hypothetical protein LOC100264322-1e-35At5g64040PSANC.G.S.X.
0.415e-94343Zea maysZm.959.1.A1_atAY103702.1photosystem I N subunit1-1e-4At5g64040PSANC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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