Gene omics information

Query gene ID	Contig319_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.53	69.7	Contig319_at	Contig319	-	-	2e-48	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	S.X.	H.G.	Please select
0.52	68.3	Contig3199_at	Contig3199	-	-	7e+0	At4g17850	-	S.X.	H.G.	Please select
0.44	58.9	Contig3198_x_at	Contig3198	-	-	6e+0	At5g25940	early nodulin-related	S.X.	H.G.	Please select
0.33	42.6	Contig6949_at	Contig6949	-	-	2e+0	At2g25230	MYB100 (myb domain protein 100)	S.X.	H.G.	Please select
0.31	38.6	rbaal31j11_s_at	rbaal31j11	-	-	1e+0	At4g20410	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	S.X.	H.G.	Please select
0.29	35.5	Contig9301_at	Contig9301	-	-	3e-2	At1g14860	atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)	S.X.	H.G.	Please select
0.25	28.9	Contig14721_at	Contig14721	-	-	5e+0	At4g15670	glutaredoxin family protein	S.X.	H.G.	Please select
0.23	26.1	Contig8396_at	Contig8396	-	-	6e+0	At3g20910	NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9)	S.X.	H.G.	Please select
0.21	22.6	Contig406_at	Contig406	-	-	2e+0	At5g42100	ATBG_PAP	S.X.	H.G.	Please select
0.20	21.1	Contig3498_at	Contig3498	-	-	7e-59	At5g06360	ribosomal protein S8e family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.0	99.9	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
22.3	99.8	GSM431548	pathogen isolates: Mock - rep3	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
21.8	99.8	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
21.2	99.7	GSM431551	pathogen isolates: Polymyxa graminis - rep3	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
18.7	99.7	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
18.3	99.7	GSM431572	pathogen isolates: Polymyxa betae - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
15.8	99.6	GSM431569	pathogen isolates: Mock inoculated control - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
15.7	99.6	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
15.5	99.6	GSM431573	pathogen isolates: Polymyxa betae - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
10.2	99.1	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.39	0	1118	Contig326_x_at	Contig326	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.52	1e-143	508	HV12F18u_x_at	HV12F18u	-	-	1e-8	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.34	2e-93	341	Contig873_s_at	Contig873	-	-	2e-121	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.58	4e-70	264	Contig998_x_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.58	4e-70	264	Contig998_s_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.34	3e-43	174	Contig44_s_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.34	3e-43	174	Contig44_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.34	6e-41	167	HVSMEh0081E03r2_at	HVSMEh0081E03r2	-	-	2e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.22	1e-35	149	HV10C20u_x_at	HV10C20u	-	-	5e+0	At2g31345	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.24	2e-48	192	Arabidopsis thaliana	At5g02500	831020	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	encodes a member of heat shock protein 70 family.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.45	7e-37	155	Glycine max	GmaAffx.6593.1.S1_at	AW432211	-	-	2e-34	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.55	2e-127	456	Oryza sativa	Os.38581.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.44	4e-32	139	Populus trichocarpa	PtpAffx.112867.1.A1_at	BP932564	hypothetical protein	-	6e-43	At3g12580	HSP70 (heat shock protein 70)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.54	9e-119	426	Triticum aestivum	Ta.23807.8.S1_x_at	BJ306768	-	-	5e-62	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.29	1e-62	238	Vitis vinifera	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.48	2e-93	341	Zea mays	Zm.3081.2.A1_a_at	CF626654	heat shock protein1	-	4e-13	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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