Gene omics information

Query gene ID	Contig3160_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	Contig3160_at	Contig3160	-	-	1e-5	At3g14650	CYP72A11	S.X.	H.G.	Please select
0.73	88.7	Contig3152_at	Contig3152	-	-	2e-5	At5g39110	germin-like protein, putative	S.X.	H.G.	Please select
0.73	88.7	Contig3156_s_at	Contig3156	-	-	5e-2	At5g39190	GER2 (GERMIN-LIKE PROTEIN 2)	S.X.	H.G.	Please select
0.67	84.7	Contig19934_at	Contig19934	-	-	1e+0	At1g65484	unknown protein	S.X.	H.G.	Please select
0.40	53.1	Contig3157_at	Contig3157	-	-	1e-2	At5g38950	germin-like protein-related	S.X.	H.G.	Please select
0.38	49.5	Contig10864_at	Contig10864	-	-	5e+0	At5g38520	hydrolase, alpha/beta fold family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.4	99.9	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
31.4	99.9	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
17.3	99.6	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
14.2	99.5	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
10.9	99.2	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.1	99.1	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.1	99.1	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.7	98.9	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
8.5	98.8	GSM372990	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.5	98.6	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.38	1e-170	599	HV_CEb0021B17f2_x_at	HV_CEb0021B17f2	-	-	9e-1	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.31	2e-145	515	HV_CEb0004J20f_s_at	HV_CEb0004J20f	-	-	2e+0	At5g63634	unknown protein	C.G.	S.X.	Please select
0.07	3e-11	69	Contig25441_at	Contig25441	-	-	3e-14	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.06	2e-9	63	HVSMEa0013F14r2_at	HVSMEa0013F14r2	-	-	8e-5	At3g14680	CYP72A14	C.G.	S.X.	Please select
0.05	1e-4	48	Contig17284_at	Contig17284	-	-	6e-2	At3g14650	CYP72A11	C.G.	S.X.	Please select
0.09	7e-3	42	Contig15063_at	Contig15063	-	-	2e+0	At4g13690	unknown protein	C.G.	S.X.	Please select
0.03	7e-3	42	HVSMEa0003M04r2_at	HVSMEa0003M04r2	-	-	1e+0	At3g14630	CYP72A9	C.G.	S.X.	Please select
0.09	7e-3	42	Contig15063_s_at	Contig15063	-	-	2e+0	At4g13690	unknown protein	C.G.	S.X.	Please select
0.02	3e-2	40	Contig3047_s_at	Contig3047	-	-	1e-2	At2g46960	CYP709B1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e-5	52	Arabidopsis thaliana	At3g14650	820693	CYP72A11	putative cytochrome P450	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.09	5e-3	44	Glycine max	Gma.7159.1.A1_at	BU545176	-	-	1e+0	At3g14690	CYP72A15	C.G.	S.X.	Please select
0.53	2e-151	537	Oryza sativa	Os01g0627500	AK105255.1	-	Cytochrome P450 family protein	3e-1	At3g14630	CYP72A9	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	8e-2	40	Populus trichocarpa	PtpAffx.209960.1.S1_s_at	pmrna19645	cytochrome P450 /// cytochrome P450	-	2e-4	At1g11610	CYP71A18	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.80	0	1390	Triticum aestivum	Ta.13841.1.S1_at	AJ440511	-	-	6e-5	At3g14680	CYP72A14	C.G.	S.X.	Please select
0.04	3e-1	36	Vitis vinifera	1619325_at	CF211836	hypothetical protein LOC100263459	-	6e-4	At3g14660	CYP72A13	C.G.	S.X.	Please select
0.56	5e-105	381	Zea mays	Zm.5744.1.A1_at	BM332131	hypothetical protein LOC100272761	-	1e+0	At3g14640	CYP72A10	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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