Gene omics information

Query gene ID Contig3102_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3102_atContig3102--2e-13At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)S.X.H.G.
0.5572.0Contig3100_atContig3100--1e-5At4g16830nuclear RNA-binding protein (RGGA)S.X.H.G.
0.5572.0Contig2575_s_atContig2575--2e-1At4g27540PRA1.H (PRENYLATED RAB ACCEPTOR 1.H)S.X.H.G.
0.3342.6Contig4366_atContig4366--5e-16At5g49810MMTS.X.H.G.
0.3037.0Contig3850_atContig3850--1e-57At1g7921020S proteasome alpha subunit B, putativeS.X.H.G.
0.108.4Contig4563_atContig4563--5e-15At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
6.298.0GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
4.096.0GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
3.995.8GSM431550pathogen isolates: Polymyxa graminis - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.895.7GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
3.695.3GSM398258Martin_5d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.394.6GSM146357Golden Promise Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.394.6GSM398255Martin_3d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.294.3GSM146363Maythorpe Root Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.294.3GSM398257Martin_3d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.194.1GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9902327Contig3102_s_atContig3102--2e-13At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
0.510755HS17M23u_atHS17M23u--7e-5At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.202e-23109Contig4878_atContig4878--8e-19At1g47260GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)C.G.S.X.
0.242e-1893HB24H11r_s_atHB24H11r--8e-1At3g10590myb family transcription factorC.G.S.X.
0.027e-238Contig9518_atContig9518--5e+0At5g46160ribosomal protein L14 family protein / huellenlos paralog (HLP)C.G.S.X.
0.017e-238Contig8045_atContig8045--2e-1At5g58200unknown proteinC.G.S.X.
0.013e-136Contig15086_atContig15086--6e-4At5g40570surfeit locus protein 2 family protein / SURF2 family proteinC.G.S.X.
0.023e-136Contig13615_atContig13615--1e-5At4g15120VQ motif-containing proteinC.G.S.X.
0.013e-136Contig112_atContig112--2e-3At5g23950C2 domain-containing proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.252e-1377Arabidopsis thalianaAt5g66510836783GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.---C.G.S.X.
0.188e-29129Glycine maxGma.16388.1.S1_atCD403252--1e-42At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.561e-167591Oryza sativaOs01g0283100AK071713.1-Ferripyochelin-binding protein-like1e-35At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.241e-73278Populus trichocarpaPtp.2146.1.S1_atCK088192hypothetical protein-5e-109At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.7601120Triticum aestivumTa.3097.1.S1_atCD937885--2e-7At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
0.222e-60232Vitis vinifera1608449_atCB349956hypothetical protein LOC100247109-6e-72At1g19580GAMMA CA1 (GAMMA CARBONIC ANHYDRASE 1)C.G.S.X.
0.520634Zea maysZm.15626.1.S1_atCA404507--1e-8At5g66510GAMMA CA3 (GAMMA CARBONIC ANHYDRASE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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