Gene omics information

Query gene ID Contig3074_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8694.8Contig3074_atContig3074--6e+0At3g52090NRPB11S.X.H.G.
0.6581.4HK04G23r_s_atHK04G23r--1e+1At5g57280methyltransferaseS.X.H.G.
0.5874.9HK05B20r_s_atHK05B20r--1e+0At1g27000bZIP family transcription factorS.X.H.G.
0.5774.9Contig3070_s_atContig3070--8e+0At5g13260unknown proteinS.X.H.G.
0.5674.3Contig15199_atContig15199--4e+0At2g40150-S.X.H.G.
0.5066.9Contig4561_atContig4561--2e-69At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)S.X.H.G.
0.4559.3Contig23245_atContig23245--5e-4At5g60550GRIK2 (GEMINIVIRUS REP INTERACTING KINASE 2)S.X.H.G.
0.4559.3Contig25106_atContig25106--4e+0At5g64990AtRABH1a (Arabidopsis Rab GTPase homolog H1a)S.X.H.G.
0.4458.9Contig3070_atContig3070--8e+0At5g13260unknown proteinS.X.H.G.
0.4458.9Contig4560_x_atContig4560--2e-1At1g29000heavy-metal-associated domain-containing proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.699.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.399.3GSM261064Xantha s-46 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
10.999.2GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
10.899.2GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.898.9GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.598.8GSM1608317% SWC rep1GSE6990Barley drought stress
7.698.6GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
7.598.6GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stress
7.598.6GSM16081938% SWC rep1GSE6990Barley drought stress
6.998.3GSM16082619% SWC rep3GSE6990Barley drought stress
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.640747Contig3063_x_atContig3063--3e-1At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)C.G.S.X.
0.640747Contig3063_s_atContig3063--3e-1At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)C.G.S.X.
0.641e-150531Contig3062_x_atContig3062--3e+0At1g58235unknown proteinC.G.S.X.
0.528e-127452HB14A07r_x_atHB14A07r--3e+0At2g37435cysteine-type endopeptidase inhibitorC.G.S.X.
0.221e-104379Contig3067_atContig3067--3e+0At5g57815cytochrome c oxidase subunit 6b, putativeC.G.S.X.
0.485e-88323Contig3070_s_atContig3070--8e+0At5g13260unknown proteinC.G.S.X.
0.485e-88323Contig3070_atContig3070--8e+0At5g13260unknown proteinC.G.S.X.
0.172e-66252Contig3066_s_atContig3066--3e+0At3g05950germin-like protein, putativeC.G.S.X.
0.172e-66252Contig3066_atContig3066--3e+0At3g05950germin-like protein, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e+032Arabidopsis thalianaAt3g52090824372NRPB11Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.---C.G.S.X.
0.035e-136Glycine maxGma.374.1.A1_atAW309650--1e-3At3g29250copper ion binding / oxidoreductaseC.G.S.X.
0.033e+034Oryza sativaOsAffx.2379.1.S1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.119039.1.S1_atDN486369hypothetical protein-8e-14At5g05970NEDD1 (NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1)C.G.S.X.
0.046e+032Triticum aestivumTaAffx.1170.1.S1_atCK210809--5e-3At5g39240unknown proteinC.G.S.X.
0.032e+032Vitis vinifera1621524_atCA812233--1e+0At1g49560myb family transcription factorC.G.S.X.
0.031e+130Zea maysZmAffx.70.1.A1_atAI665164--8e-1At2g37780DC1 domain-containing proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage