Gene omics information

Query gene ID Contig3070_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.3647.1Contig3070_s_atContig3070--8e+0At5g13260unknown proteinS.X.H.G.
0.6077.3Contig4560_x_atContig4560--2e-1At1g29000heavy-metal-associated domain-containing proteinS.X.H.G.
0.5572.0Contig3871_atContig3871--3e-41At5g20570RBX1 (RING-BOX 1)S.X.H.G.
0.5572.0Contig4561_atContig4561--2e-69At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)S.X.H.G.
0.4762.2HK05B20r_s_atHK05B20r--1e+0At1g27000bZIP family transcription factorS.X.H.G.
0.4053.1HK04G23r_s_atHK04G23r--1e+1At5g57280methyltransferaseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.098.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.898.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.998.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.798.3GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.498.1GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.797.7GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.397.4GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM6890427 h salt stressed replicate 1GSE3097Barley1 salinity stress study
4.796.9GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
4.696.8GSM16082319% SWC rep1GSE6990Barley drought stress
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9802028Contig3070_atContig3070--8e+0At5g13260unknown proteinC.G.S.X.
0.470767rbags24o03_atrbags24o03--3e-1At5g58784dehydrodolichyl diphosphate synthaseC.G.S.X.
0.482e-85315Contig3074_atContig3074--6e+0At3g52090NRPB11C.G.S.X.
0.427e-82303Contig3063_x_atContig3063--3e-1At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)C.G.S.X.
0.427e-82303Contig3063_s_atContig3063--3e-1At3g51780ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4)C.G.S.X.
0.342e-79295HB14A07r_x_atHB14A07r--3e+0At2g37435cysteine-type endopeptidase inhibitorC.G.S.X.
0.484e-77287Contig3062_x_atContig3062--3e+0At1g58235unknown proteinC.G.S.X.
0.181e-64246Contig3067_atContig3067--3e+0At5g57815cytochrome c oxidase subunit 6b, putativeC.G.S.X.
0.194e-49194Contig3065_x_atContig3065--1e+1At5g67190AP2 domain-containing transcription factor, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e+032Arabidopsis thalianaAt5g13260831167unknown proteinF:unknown;P:biological_process unknown;C:unknown;MFOPBAV---C.G.S.X.
0.035e-240Glycine maxPsAffx.psHB005xN04f_atPsAffx.psHB005xN04f--1e+1At3g04943LCR41 (Low-molecular-weight cysteine-rich 41)C.G.S.X.
0.033e-138Oryza sativaOsAffx.22099.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.8410.2.A1_a_atCV255782hypothetical protein-5e-21At4g19210ATRLI2C.G.S.X.
0.086e-1065Triticum aestivumTaAffx.89616.1.S1_atCA610085--2e-4At2g04700ferredoxin thioredoxin reductase catalytic beta chain family proteinC.G.S.X.
0.022e+032Vitis vinifera1615013_atCB341279--3e-10At4g28706pfkB-type carbohydrate kinase family proteinC.G.S.X.
0.022e-136Zea maysZm.8147.1.A1_atBM073080hypothetical protein LOC100273624-5e+0At2g15830unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage