Gene omics information

Query gene ID Contig3054_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig3054_atContig3054--3e-5At4g28050TET7 (TETRASPANIN7)S.X.H.G.
0.9198.1HV_CEb0010F15r2_atHV_CEb0010F15r2--5e-6At2g45500ATP binding / nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.7388.7Contig22222_atContig22222--1e+0At5g64160unknown proteinS.X.H.G.
0.5066.9HVSMEc0001K23f2_s_atHVSMEc0001K23f2--4e+0At5g24190-S.X.H.G.
0.4661.0HM10J16r_atHM10J16r--4e+0At5g64400-S.X.H.G.
0.4356.4Contig9685_atContig9685--2e-3At1g14990unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
94.8100.0GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
87.6100.0GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
52.0100.0GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
27.999.8GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
21.899.8GSM71140OWB-D stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
20.199.7GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
17.799.7GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
14.099.5GSM71139OWB-D stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
11.999.3GSM71145OWB-D unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
10.599.2GSM71146OWB-D unstress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801935Contig3054_s_atContig3054--3e-5At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.547e-91333HVSMEf0019G03r2_x_atHVSMEf0019G03r2--1e-2At2g23810TET8 (TETRASPANIN8)C.G.S.X.
0.185e-1581Contig7785_atContig7785--3e-14At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.122e-859Contig6728_atContig6728--6e-1At5g23030TET12 (TETRASPANIN12)C.G.S.X.
0.067e-857HA28N02r_atHA28N02r--1e-8At2g23810TET8 (TETRASPANIN8)C.G.S.X.
0.067e-857HA28N02r_s_atHA28N02r--1e-8At2g23810TET8 (TETRASPANIN8)C.G.S.X.
0.016e-238Contig5704_atContig5704--2e-1At1g49640hydrolaseC.G.S.X.
0.036e-238Contig14263_atContig14263--2e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)C.G.S.X.
0.026e-238Contig8961_atContig8961--1e-1At5g66400RAB18 (RESPONSIVE TO ABA 18)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.153e-550Arabidopsis thalianaAt4g28050828920TET7 (TETRASPANIN7)Member of TETRASPANIN family---C.G.S.X.
0.152e-22107Glycine maxGma.2590.7.S1_atCA783976--7e-10At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.431e-98361Oryza sativaOs09g0425900AK061801.1-Senescence-associated protein 51e-2At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.071e-242Populus trichocarpaPtpAffx.14093.1.A1_s_atCV232681hypothetical protein-4e-1At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.750989Triticum aestivumTa.14022.3.S1_atCA689236--2e-7At4g28050TET7 (TETRASPANIN7)C.G.S.X.
0.092e-446Vitis vinifera1608186_atCB007992hypothetical protein LOC100243286-7e-4At4g30430TET9 (TETRASPANIN9)C.G.S.X.
0.462e-84311Zea maysZm.1425.1.S1_atBM380501senescence-associated protein DH-3e-9At2g23810TET8 (TETRASPANIN8)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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