Gene omics information

Query gene ID Contig2946_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig2946_atContig2946--5e-5At5g03630ATMDAR2S.X.H.G.
0.8092.5Contig5342_atContig5342--4e-3At3g56150EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C)S.X.H.G.
0.6784.7Contig4592_s_atContig4592--3e-22At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)S.X.H.G.
0.5066.9Contig3963_s_atContig3963--7e-39At4g19210ATRLI2S.X.H.G.
0.4863.2Contig5574_atContig5574--2e-11At4g30210ATR2 (ARABIDOPSIS P450 REDUCTASE 2)S.X.H.G.
0.3240.3Contig5777_atContig5777--3e-11At5g47570unknown proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
11.699.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
10.099.1GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
8.798.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
8.298.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.598.6GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
7.198.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
6.798.3GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.598.2GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
5.797.7GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
5.397.4GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.524e-106385Contig2943_s_atContig2943--8e-28At3g52880monodehydroascorbate reductase, putativeC.G.S.X.
0.026e-342Contig17133_atContig17133--2e+0At3g13140hydroxyproline-rich glycoprotein family proteinC.G.S.X.
0.011e-138Contig5266_atContig5266--2e-13At5g19220APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)C.G.S.X.
0.021e-138Contig17844_atContig17844--2e+0At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)C.G.S.X.
0.011e-138Contig5267_atContig5267ADP-glucose pyrophosphorylase large subunit-4e-52At5g19220APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)C.G.S.X.
0.014e-136Contig4113_atContig4113--2e+0At4g29190zinc finger (CCCH-type) family proteinC.G.S.X.
0.024e-136Contig12481_atContig12481--1e+0At2g10535LCR29 (Low-molecular-weight cysteine-rich 29)C.G.S.X.
0.024e-136HVSMEh0082C16r2_atHVSMEh0082C16r2--2e+0At2g29525-C.G.S.X.
0.024e-136EBro04_SQ002_E11_atEBro04_SQ002_E11--5e+0At4g19270unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.225e-550Arabidopsis thalianaAt5g03630831774ATMDAR2F:monodehydroascorbate reductase (NADH) activity;P:response to cadmium ion, response to salt stress;C:cytosol;BOMFPA---C.G.S.X.
0.027e-240Glycine maxGma.7497.2.S1_s_atBI427078OAS-TL4 cysteine synthase-6e-21At3g59760OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C)C.G.S.X.
0.6601136Oryza sativaOs08g0557600AK102459.1-Monodehydroascorbate reductase (EC 1.6.5.4) (MDAR)(Ascorbate free radical reductase) (AFR reductase)2e-20At5g03630ATMDAR2C.G.S.X.
0.183e-1067Populus trichocarpaPtp.5082.1.S1_s_atCX654214hypothetical protein-8e-41At3g52880monodehydroascorbate reductase, putativeC.G.S.X.
0.6301308Triticum aestivumTa.2706.1.S1_a_atBJ254536--4e-8At5g03630ATMDAR2C.G.S.X.
0.052e-136Vitis vinifera1612451_atCF609753monodehydroascorbate reductase-3e-22At3g52880monodehydroascorbate reductase, putativeC.G.S.X.
0.640991Zea maysZm.1708.1.S1_atCF626580--1e-12At3g52880monodehydroascorbate reductase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage