Gene omics information

Query gene ID Contig2878_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7790.8Contig2878_atContig2878--4e-1At3g496302-oxoacid-dependent oxidase, putativeS.X.H.G.
0.6077.3Contig4809_atContig4809--9e-2At1g64370unknown proteinS.X.H.G.
0.5572.0Contig18125_atContig18125--2e-6At4g13250short-chain dehydrogenase/reductase (SDR) family proteinS.X.H.G.
0.5572.0HF11O19r_atHF11O19r--8e-5At3g25140QUA1 (QUASIMODO 1)S.X.H.G.
0.4053.1HV_CEb0011B08r2_atHV_CEb0011B08r2--4e+0At3g61880CYP78A9 (CYTOCHROME P450 78A9)S.X.H.G.
0.3545.1Contig8778_s_atContig8778--2e-2At3g10185-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.199.9GSM282026Malting_day1_Legacy_rep4GSE11200Expression data from malting barley seeds
43.699.9GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.699.3GSM261040Dicktoo-deacclimation-rep2GSE10329Low temperature stress in cv. Dicktoo
10.899.2GSM261030Dicktoo-control-rep1GSE10329Low temperature stress in cv. Dicktoo
10.499.2GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. Dicktoo
10.399.1GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expression
9.198.9GSM261032Dicktoo control-rep3GSE10329Low temperature stress in cv. Dicktoo
7.798.6GSM71139OWB-D stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
7.498.5GSM16081938% SWC rep1GSE6990Barley drought stress
7.298.5GSM71142OWB-R stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.315e-42171Contig2877_atContig2877--6e-1At4g19270unknown proteinC.G.S.X.
0.303e-40165Contig7394_atContig7394--1e+1At5g54340zinc finger (C2H2 type) protein-relatedC.G.S.X.
0.241e-30133Contig8009_atContig8009--3e+0At4g19270unknown proteinC.G.S.X.
0.234e-30131Contig2873_s_atContig2873--2e-4At1g31630AGL86 (AGAMOUS-LIKE 86)C.G.S.X.
0.162e-23109Contig2876_atContig2876--5e-2At5g17120-C.G.S.X.
0.242e-1375Contig17140_atContig17140--5e+0At2g23670YCF37 (Arabidopsis homolog of Synechocystis YCF37)C.G.S.X.
0.075e-857Contig7170_atContig7170--2e+0At1g32540LOL1 (LSD ONE LIKE 1)C.G.S.X.
0.061e-550Contig8819_atContig8819--2e+0At4g19270unknown proteinC.G.S.X.
0.061e-550Contig8819_s_atContig8819--2e+0At4g19270unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-136Arabidopsis thalianaAt3g496308241252-oxoacid-dependent oxidase, putativeF:oxidoreductase activity, iron ion binding;P:aging, cellular response to starvation;C:endomembrane system;POBFM---C.G.S.X.
0.036e-136Glycine maxGmaAffx.38753.1.S1_atAI748583--4e-2At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)C.G.S.X.
0.271e-39165Oryza sativaOs10g0555600AF261274.1-Beta-expansin precursor4e-2At3g06080unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.37401.1.A1_s_atCV253800hypothetical protein-7e-1At3g15750unknown proteinC.G.S.X.
0.730660Triticum aestivumTa.3729.1.A1_atBJ249762--5e+0At2g43840UDP-glucoronosyl/UDP-glucosyl transferase family proteinC.G.S.X.
0.032e-342Vitis vinifera1619576_atCB834337--2e+1At5g51040unknown proteinC.G.S.X.
0.435e-54210Zea maysZm.675.2.A1_atAF332178.1beta-expansin 5-3e-1At4g19270unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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