Gene omics information

Query gene ID Contig2867_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7489.1Contig2867_atContig2867--8e-14At5g01320pyruvate decarboxylase, putativeS.X.H.G.
0.8293.1Contig3389_atContig3389--2e-1At3g60530zinc finger (GATA type) family proteinS.X.H.G.
0.7891.2Contig19601_atContig19601--5e+0At5g01225unknown proteinS.X.H.G.
0.7891.2Contig11272_atContig11272--8e-2At5g4008060S ribosomal protein-relatedS.X.H.G.
0.7790.8Contig6716_atContig6716--2e-25At4g31780MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)S.X.H.G.
0.7689.8Contig15801_atContig15801--3e-8At3g24730catalyticS.X.H.G.
0.7589.5Contig9603_atContig9603--3e+0At5g61230ankyrin repeat family proteinS.X.H.G.
0.7287.4EBro01_SQ003_E14_s_atEBro01_SQ003_E14--1e+1At3g19150KRP6 (KIP-RELATED PROTEIN 6)S.X.H.G.
0.6480.9Contig15403_atContig15403--6e-7At3g13065SRF4 (STRUBBELIG-RECEPTOR FAMILY 4)S.X.H.G.
0.6279.1Contig9716_atContig9716--3e-6At5g46800BOU (A BOUT DE SOUFFLE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
61.9100.0GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
54.9100.0GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
39.099.9GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
21.899.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
18.999.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
17.999.7GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
16.699.6GSM282034Malting_steeped_Morex_rep1GSE11200Expression data from malting barley seeds
14.499.5GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.198.0GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.797.7GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.222e-50200Contig5532_atContig5532--2e-16At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.101e-47190HW08O18u_s_atHW08O18u--4e+0At4g12890gamma interferon responsive lysosomal thiol reductase family protein / GILT family proteinC.G.S.X.
0.182e-40167Contig5533_atContig5533--2e-7At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.013e-240Contig15028_atContig15028--4e-1At1g35310MLP168 (MLP-LIKE PROTEIN 168)C.G.S.X.
0.013e-240Contig17301_atContig17301--1e-2At1g28280VQ motif-containing proteinC.G.S.X.
0.023e-240Contig6346_atContig6346--5e+0At5g59780MYB59 (MYB DOMAIN PROTEIN 59)C.G.S.X.
0.011e-138Contig8201_atContig8201--7e-1At5g59310LTP4 (LIPID TRANSFER PROTEIN 4)C.G.S.X.
0.011e-138Contig17901_atContig17901--6e+0At4g10300-C.G.S.X.
0.011e-138Contig5918_atContig5918--9e-6At3g60340palmitoyl protein thioesterase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.308e-1479Arabidopsis thalianaAt5g01320830867pyruvate decarboxylase, putativeF:in 6 functions;P:unknown;C:cellular_component unknown;BOFPAMV---C.G.S.X.
0.272e-21105Glycine maxGma.11273.1.S1_s_atCD396662--2e-66At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.7301891Oryza sativaOs03g0293500AK119500.1-Pyruvate decarboxylase isozyme 2 (EC 4.1.1.1)(PDC) (Fragment)2e-24At5g01320pyruvate decarboxylase, putativeC.G.S.X.
0.212e-1895Populus trichocarpaPtpAffx.31420.1.A1_s_atCV236289hypothetical protein-6e-35At4g33070pyruvate decarboxylase, putativeC.G.S.X.
0.8403003Triticum aestivumTa.19423.1.S1_a_atCD934753--2e-36At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.261e-31137Vitis vinifera1609684_atCB009168similar to pyruvate decarboxylase-3e-41At5g54960PDC2 (pyruvate decarboxylase-2)C.G.S.X.
0.6701756Zea maysZm.3994.1.S1_atAF370005.1pyruvate decarboxylase3-2e-14At5g01320pyruvate decarboxylase, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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