Gene omics information

Query gene ID Contig2832_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5268.3Contig2832_s_atContig2832--6e+0At4g36530hydrolase, alpha/beta fold family proteinS.X.H.G.
0.8293.1Contig3263_atContig3263--9e-38At4g20360ATRABE1B (ARABIDOPSIS RAB GTPASE HOMOLOG E1B)S.X.H.G.
0.6480.9Contig4296_atContig4296--5e-38At1g21720PBC1 (PROTEASOME BETA SUBUNIT C1)S.X.H.G.
0.6380.3Contig326_x_atContig326--0At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)S.X.H.G.
0.5975.8Contig6203_atContig6203--1e-3At1g70110lectin protein kinase family proteinS.X.H.G.
0.4458.9Contig5724_atContig5724--4e-12At1g06570PDS1 (PHYTOENE DESATURATION 1)S.X.H.G.
0.3950.5Contig3118_atContig3118--3e-68At3g27240cytochrome c1, putativeS.X.H.G.
0.3647.1Contig3794_atContig3794--7e-31At1g16890ubiquitin-conjugating enzyme, putativeS.X.H.G.
0.3240.3Contig6968_atContig6968--8e-19At3g22830AT-HSFA6BS.X.H.G.
0.3138.6HVSMEb0001F21r2_x_atHVSMEb0001F21r2--4e+0At5g48170SLY2 (SLEEPY2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.797.7GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seeds
5.697.7GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM238438Embryo 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM282022Malting_day4_Merit_rep4GSE11200Expression data from malting barley seeds
5.297.4GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.097.2GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seeds
5.097.2GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.997.1GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seeds
4.997.1GSM431568pathogen isolates: Mock inoculated control - rep1GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
4.696.8GSM431570pathogen isolates: Mock inoculated control - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7501122Contig2833_atContig2833--9e-3At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.091e-550Contig3378_atContig3378--2e+0At5g67500VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2)C.G.S.X.
0.064e-238Contig4587_atContig4587--2e-1At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)C.G.S.X.
0.012e-136Contig5706_atContig5706cellulose synthase-like CslF6-8e-2At5g11600unknown proteinC.G.S.X.
0.013e+032Contig3250_atContig3250--1e-68At3g14940ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)C.G.S.X.
0.023e+032Contig10972_atContig10972--1e-5At1g32500ATNAP6 (NON-INTRINSIC ABC PROTEIN 6)C.G.S.X.
0.013e+032Contig7908_atContig7908--3e-12At2g41040methyltransferase-relatedC.G.S.X.
0.013e+032Contig7339_s_atContig7339--1e-3At3g24150unknown proteinC.G.S.X.
0.023e+032Contig1778_s_atContig1778--2e+0At3g15020malate dehydrogenase (NAD), mitochondrial, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e+032Arabidopsis thalianaAt4g36530829805hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:unknown;C:chloroplast;BOMPFAV---C.G.S.X.
0.045e-136Glycine maxGma.17773.1.A1_atBF070270peroxisomal voltage-dependent anion-selective channel protein-1e-10At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.412e-81303Oryza sativaOs09g0361400AK060652.1-Voltage-dependent anion channel6e-1At5g15000-C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.4082.3.S1_a_atAJ767758porin/voltage-dependent anion-selective channel protein-5e-3At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.600741Triticum aestivumTa.15275.1.S1_atBJ297367--5e-5At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.051e-446Vitis vinifera1622610_atCF413855hypothetical protein LOC100264665-5e-6At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
0.361e-45182Zea maysZm.467.1.S1_atAF178950.1voltage-dependent anion channel protein 1a-3e-3At5g15090VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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