Gene omics information

Query gene ID Contig2790_s_at
Gene name thaumatin-like protein TLP7
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7187.1Contig2790_s_atContig2790thaumatin-like protein TLP7-3e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)S.X.H.G.
0.8694.8Contig22115_atContig22115--7e-2At4g24960ATHVA22DS.X.H.G.
0.6784.7Contig2212_s_atContig2212Pathogenesis-related protein 1-4e+0At4g25790allergen V5/Tpx-1-related family proteinS.X.H.G.
0.6784.7Contig12050_atContig12050--4e+0At5g54740protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinS.X.H.G.
0.5572.0Contig22098_atContig22098--4e-2At1g01020ARV1S.X.H.G.
0.5572.0Contig22141_s_atContig22141--3e+0At3g07440unknown proteinS.X.H.G.
0.4356.4Contig11775_atContig11775--4e-1At5g61230ankyrin repeat family proteinS.X.H.G.
0.4053.1Contig2994_atContig2994--9e-11At1g32470glycine cleavage system H protein, mitochondrial, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
46.199.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
44.799.9GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
40.299.9GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
32.799.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
29.899.9GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
20.699.7GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
17.199.6GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
16.199.6GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
10.799.2GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
10.699.2GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grains
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.730940Contig2788_x_atContig2788thaumatin-like protein TLP7-5e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.670928Contig2789_atContig2789--5e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.562e-164577Contig2787_s_atContig2787thaumatin-like protein TLP6-5e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.483e-110397Contig2792_s_atContig2792thaumatin-like protein TLP5-4e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.353e-76284rbaak13h13_s_atrbaak13h13--2e+1At3g03160unknown proteinC.G.S.X.
0.263e-33141HV_CEb0001A10f2_atHV_CEb0001A10f2--1e+1At5g42630ATS (ABERRANT TESTA SHAPE)C.G.S.X.
0.111e-1169Contig3667_s_atContig3667thaumatin-like protein TLP8 /// m12 protein-7e-18At4g26930MYB97 (myb domain protein 97)C.G.S.X.
0.111e-446EBem10_SQ002_I10_s_atEBem10_SQ002_I10m12 protein-8e+0At3g59460-C.G.S.X.
0.072e-342Contig3947_s_atContig3947thaumatin-like protein TLP4-4e+0At2g17860pathogenesis-related thaumatin family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.073e-136Arabidopsis thalianaAt1g75040843842PR5 (PATHOGENESIS-RELATED GENE 5)Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.---C.G.S.X.
0.074e-136Glycine maxGma.2821.1.S1_atAI461152GmOLPa mRNA for PR-5 protein-5e-1At4g24180-C.G.S.X.
0.361e-48194Oryza sativaOs12g06302009640.m04277-Antifungal protein R (Fragment)1e-1At3g55880unknown proteinC.G.S.X.
0.071e-138Populus trichocarpaPtpAffx.2271.1.S1_s_atCA933996hypothetical protein-1e-4At4g11650ATOSM34 (osmotin 34)C.G.S.X.
0.562e-171601Triticum aestivumTa.25053.1.S1_atAF442967.1thaumatin-like protein-5e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)C.G.S.X.
0.075e-340Vitis vinifera1620390_s_atAF532965.1thaumatin-like protein /// hypothetical protein LOC100246096 /// hypothetical protein LOC100242737-7e+0At5g22960serine carboxypeptidase S10 family proteinC.G.S.X.
0.224e-1787Zea maysZm.16226.1.A1_atBM348522Hypothetical LOC542299-4e-1At2g20180PIL5 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 5)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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