Gene omics information

Query gene ID Contig2718_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9Contig2718_s_atContig2718--4e-27At3g25230ROF1 (ROTAMASE FKBP 1)S.X.H.G.
0.5066.9Contig13233_atContig13233--5e-1At2g42260UVI4 (UV-B-INSENSITIVE 4)S.X.H.G.
0.5066.9Contig9794_atContig9794--4e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)S.X.H.G.
0.5066.9Contig2717_atContig2717--5e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeS.X.H.G.
0.5066.9Contig9793_atContig9793--8e-26At1g61140EDA16 (embryo sac development arrest 16)S.X.H.G.
0.5066.9HVSMEb0006I05f_x_atHVSMEb0006I05f--8e-1At5g19930integral membrane family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.099.1GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
9.699.0GSM419977Palea_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
9.699.0GSM440965Control palea_Rep3GSE17669Gene expression in the barley spike during drought stress
8.398.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
7.398.5GSM419974Lemma_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spike
7.398.5GSM440959Control lemma_Rep3GSE17669Gene expression in the barley spike during drought stress
6.798.3GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
6.598.2GSM146370Golden Promise shoot Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.897.8GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.597.6GSM419975Palea_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spike
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.5401134Contig2721_atContig2721--3e-1At4g26820-C.G.S.X.
0.342e-30133Contig2720_atContig2720--9e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
0.154e-756Contig1692_atContig1692--1e-12At3g25230ROF1 (ROTAMASE FKBP 1)C.G.S.X.
0.042e-654Contig1690_s_atContig1690--4e-1At4g08270-C.G.S.X.
0.093e-550Contig2717_atContig2717--5e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
0.093e-550HVSMEg0015J04f_s_atHVSMEg0015J04f--6e-5At3g25230ROF1 (ROTAMASE FKBP 1)C.G.S.X.
0.093e-550Contig2717_s_atContig2717--5e-12At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
0.024e-136Contig15845_s_atContig15845--2e-2At5g66400RAB18 (RESPONSIVE TO ABA 18)C.G.S.X.
0.014e-136Contig7598_atContig7598--4e+0At5g21020-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.164e-27123Arabidopsis thalianaAt3g25230822117ROF1 (ROTAMASE FKBP 1)Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.---C.G.S.X.
0.141e-656Glycine maxGmaAffx.81432.2.S1_atBF595545--2e-45At3g25230ROF1 (ROTAMASE FKBP 1)C.G.S.X.
0.5001005Oryza sativaOs02g0491400AK073233.1-Peptidylprolyl isomerase7e-27At3g25230ROF1 (ROTAMASE FKBP 1)C.G.S.X.
0.062e-861Populus trichocarpaPtpAffx.124689.1.S1_atCK111963hypothetical protein-4e-32At3g25230ROF1 (ROTAMASE FKBP 1)C.G.S.X.
0.6602052Triticum aestivumTa.6047.1.S1_atCK155170--3e-10At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
0.184e-1581Vitis vinifera1609010_atCB346849hypothetical protein LOC100266654-4e-34At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
0.223e-32139Zea maysZm.4062.1.A1_atCF972415peptidyl-prolyl isomerase-2e-8At5g48570peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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