Gene omics information

Query gene ID Contig2671_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig2671_atContig2671--4e-8At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)S.X.H.G.
0.9198.1HVSMEf0009F19r2_atHVSMEf0009F19r2--4e+0At4g28397-S.X.H.G.
0.7790.8EBem10_SQ005_L23_x_atEBem10_SQ005_L23--7e+0At5g0385040S ribosomal protein S28 (RPS28B)S.X.H.G.
0.7388.7Contig2672_atContig2672xyloglucan xyloglucosyl transferase-2e-3At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)S.X.H.G.
0.6784.7Contig2673_atContig2673--1e-17At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)S.X.H.G.
0.6784.7Contig2681_atContig2681--2e-14At1g02305cathepsin B-like cysteine protease, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
26.099.8GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
21.799.8GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
18.899.7GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
15.899.6GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
12.599.4GSM71148OWB-R unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expression
11.599.3GSM146369Golden Promise shoot Control, biological rep1GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.198.9GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expression
7.998.7GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.698.6GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
7.098.4GSM261026ABA-Early-rep3GSE10328ABA experiment
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.431e-157555Contig2670_x_atContig2670--5e-20At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.431e-157555Contig2670_s_atContig2670--5e-20At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.401e-126452Contig2669_atContig2669--8e-13At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.389e-122436Contig2673_atContig2673--1e-17At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.321e-77289Contig2672_atContig2672xyloglucan xyloglucosyl transferase-2e-3At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)C.G.S.X.
0.212e-30133HVSMEb0004L16r2_atHVSMEb0004L16r2--1e+0At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.231e-25117Contig5258_atContig5258--2e-10At5g13870EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)C.G.S.X.
0.202e-24113Contig2957_atContig2957--4e-1At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.253e-23109Contig12692_s_atContig12692--2e-4At5g57540xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.234e-859Arabidopsis thalianaAt4g25820828687XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer.---C.G.S.X.
0.093e-1067Glycine maxGma.8077.1.S1_atBU547877--1e-41At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.640886Oryza sativaOs06g0696400AK104912.1-Xyloglycan endo-transglycosylase precursor7e-10At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.174e-1273Populus trichocarpaPtp.6778.1.S1_s_atCN520892hypothetical protein-3e-23At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.472e-78293Triticum aestivumTa.28244.1.A1_x_atCA631663endotransglucosylase/hydrolase XTH5-1e+0At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
0.151e-859Vitis vinifera1619068_atCF215954hypothetical protein LOC100250461-1e-13At4g14130XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)C.G.S.X.
0.335e-120430Zea maysZm.8890.1.S1_a_atBM379881hypothetical protein LOC100191584-1e-8At4g25820XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage