CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Contig26369_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 77.3 Contig26369_at Contig26369 - - 4e+0 At4g02620 vacuolar ATPase subunit F family protein S.X. H.G.
0.60 77.3 Contig21865_at Contig21865 - - 9e-1 At5g45870 Bet v I allergen family protein S.X. H.G.
0.60 77.3 Contig14949_at Contig14949 - - 3e-2 At3g19100 calcium-dependent protein kinase, putative / CDPK, putative S.X. H.G.
0.57 74.9 Contig13428_at Contig13428 - - 6e-5 At3g17160 unknown protein S.X. H.G.
0.46 61.0 Contig13965_at Contig13965 - - 7e+0 At5g55056 unknown protein S.X. H.G.
0.24 27.2 Contig8505_s_at Contig8505 - - 2e+0 At5g18280 ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.7 98.3 GSM261045 after 3 days in mannitol medium rep1 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.8 97.0 GSM261047 after 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.8 97.0 GSM146368 Maythorpe Root Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.7 96.9 GSM382233 Root_Hg2 GSE15295 Mercury toxicity in barley roots
4.7 96.9 GSM146362 Golden Promise Root Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.4 96.6 GSM238413 Endosperm 4DAF; Seed development; Rep 2 GSE9365 Expression data from barley maturing and germinating grains
4.3 96.4 GSM261046 after 3 days in mannitol medium rep2 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.3 96.4 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
4.3 96.4 GSM382232 Root_Hg1 GSE15295 Mercury toxicity in barley roots
4.2 96.3 GSM261044 before 3 days in mannitol medium rep3 GSE10330 Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 34 Contig3057_s_at Contig3057 - - 8e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.03 5e-1 34 Contig14390_at Contig14390 - - 3e-11 At1g26830 ATCUL3 (ARABIDOPSIS THALIANA CULLIN 3) C.G. S.X.
0.02 5e-1 34 Contig3057_at Contig3057 - - 8e-4 At1g22990 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related C.G. S.X.
0.02 2e+0 32 Contig11363_at Contig11363 - - 7e-7 At3g29185 unknown protein C.G. S.X.
0.02 2e+0 32 Contig8972_s_at Contig8972 - - 8e-10 At3g47930 ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE) C.G. S.X.
0.02 2e+0 32 Contig16145_at Contig16145 - - 2e+0 At3g44140 unknown protein C.G. S.X.
0.02 2e+0 32 Contig11345_at Contig11345 - - 1e-1 At5g05420 immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative C.G. S.X.
0.02 2e+0 32 Contig8972_at Contig8972 - - 8e-10 At3g47930 ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE) C.G. S.X.
0.02 2e+0 32 Contig3551_at Contig3551 - - 2e+0 At4g28440 DNA-binding protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At4g02620 828221 vacuolar ATPase subunit F family protein F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;MFOPA - - - C.G. S.X.
0.03 4e-1 36 Glycine max GmaAffx.89368.1.A1_s_at CK606550 - - 4e-19 At1g15270 - C.G. S.X.
0.11 1e-11 71 Oryza sativa Os11g0696600 AK073119.1 - Hypothetical protein 9e-1 At4g09590 NHL22 C.G. S.X.
0.04 2e+0 34 Populus trichocarpa PtpAffx.40315.1.S1_at BU891653 - - 9e+0 At5g28310 oxidoreductase-related C.G. S.X.
0.38 7e-73 274 Triticum aestivum TaAffx.56390.1.S1_at CA653681 - - 8e-2 At1g47820 unknown protein C.G. S.X.
0.04 3e-1 34 Vitis vinifera 1618524_x_at CF202257.1 - - 7e+0 At3g57840 self-incompatibility protein-related C.G. S.X.
0.15 8e-12 69 Zea mays Zm.3912.1.A1_at CB351314 - - 1e-1 At1g47820 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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