Gene omics information

Query gene ID	Contig25368_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.36	47.1	Contig25368_at	Contig25368	-	-	8e-2	At4g36770	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.50	66.9	HVSMEm0022N13r2_at	HVSMEm0022N13r2	-	-	7e-2	At1g01020	ARV1	S.X.	H.G.	Please select
0.50	66.9	HVSMEm0022L18r2_at	HVSMEm0022L18r2	-	-	3e+0	At4g35900	FD	S.X.	H.G.	Please select
0.47	62.2	Contig3433_x_at	Contig3433	-	-	6e+0	At3g14200	DNAJ heat shock N-terminal domain-containing protein	S.X.	H.G.	Please select
0.40	53.1	Contig24846_at	Contig24846	-	-	3e-1	At4g11750	kelch repeat-containing F-box family protein	S.X.	H.G.	Please select
0.27	32.1	HE01K03u_at	HE01K03u	-	-	5e-2	At3g51810	EM1 (LATE EMBRYOGENESIS ABUNDANT 1)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.4	99.8	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
21.6	99.8	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
21.2	99.7	GSM372982	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
16.8	99.6	GSM373007	genotype: 11542 - pathogen isolates: K1 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.4	99.5	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.8	99.4	GSM372983	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.6	99.4	GSM372986	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.3	99.4	GSM373002	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.0	99.3	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.6	99.3	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.16	4e-39	161	Contig1829_at	Contig1829	-	-	1e-2	At2g15490	UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)	C.G.	S.X.	Please select
0.22	4e-39	161	Contig1820_at	Contig1820	-	-	8e-3	At2g15490	UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)	C.G.	S.X.	Please select
0.23	1e-14	79	Contig11602_at	Contig11602	-	-	7e-2	At3g21800	UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)	C.G.	S.X.	Please select
0.05	1e-14	79	Contig14077_at	Contig14077	-	-	2e+0	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.06	2e-10	65	HVSMEb0008M09r2_at	HVSMEb0008M09r2	-	-	1e-6	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.04	2e-7	56	Contig14826_at	Contig14826	-	-	3e-1	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.05	2e-7	56	Contig14827_s_at	Contig14827	-	-	3e-1	At5g17050	UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)	C.G.	S.X.	Please select
0.05	7e-7	54	Contig18184_at	Contig18184	-	-	1e+1	At4g10450	60S ribosomal protein L9 (RPL90D)	C.G.	S.X.	Please select
0.05	4e-5	48	Contig22412_at	Contig22412	-	-	3e-4	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-2	38	Arabidopsis thaliana	At4g36770	829830	UDP-glycosyltransferase/ transferase, transferring glycosyl groups	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-2	40	Glycine max	GmaAffx.47330.1.S1_at	BU926438	-	-	2e-1	At4g09840	unknown protein	C.G.	S.X.	Please select
0.25	4e-73	276	Oryza sativa	Os01g0734800	AK102415.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	2e-4	At4g15550	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.08	3e-2	40	Populus trichocarpa	PtpAffx.29621.1.A1_at	CV226870	hypothetical protein	-	6e-4	At3g16520	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.69	9e-113	406	Triticum aestivum	Ta.30327.2.A1_at	BJ239537	-	-	4e-3	At3g21750	UGT71B1 (UDP-GLUCOSYL TRANSFERASE 71B1)	C.G.	S.X.	Please select
0.06	4e-7	54	Vitis vinifera	1611320_at	CF206248.1	hypothetical protein LOC100268157	-	2e-8	At3g16520	UDP-glucoronosyl/UDP-glucosyl transferase family protein	C.G.	S.X.	Please select
0.27	2e-31	135	Zea mays	Zm.16431.1.S1_at	CN844543	hypothetical protein LOC100274555	-	1e+0	At5g53880	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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