Gene omics information

Query gene ID Contig25138_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5572.0Contig25138_atContig25138--3e+0At1g19740ATP-dependent protease La (LON) domain-containing proteinS.X.H.G.
0.9198.1Contig25106_atContig25106--4e+0At5g64990AtRABH1a (Arabidopsis Rab GTPase homolog H1a)S.X.H.G.
0.6784.7Contig18315_atContig18315--3e-8At2g18770signal recognition particle bindingS.X.H.G.
0.6380.3Contig19129_atContig19129--2e+0At1g62250unknown proteinS.X.H.G.
0.6077.3Contig23295_atContig23295--5e+0At3g10720pectinesterase, putativeS.X.H.G.
0.5066.9Contig20268_atContig20268--4e-1At5g12140ATCYS1 (A. thaliana cystatin-1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.799.0GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
8.298.7GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seeds
6.498.1GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
6.298.0GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.697.7GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seeds
5.497.5GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
4.997.1GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.897.0GSM160464drought control rep1GSE6990Barley drought stress
4.796.9GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seeds
4.596.7GSM16082319% SWC rep1GSE6990Barley drought stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+032Contig2505_atContig2505--9e-5At2g36930zinc finger (C2H2 type) family proteinC.G.S.X.
0.012e+032Contig11159_atContig11159--8e-1At4g24980-C.G.S.X.
0.012e+032Contig8435_atContig8435--1e+0At4g31580SRZ-22C.G.S.X.
0.022e+032Contig15873_atContig15873--3e+0At3g43490zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.022e+032Contig5684_atContig5684--2e+0At5g49940NFU2 (NIFU-LIKE PROTEIN 2)C.G.S.X.
0.012e+032Contig11716_atContig11716--6e-14At2g25480-C.G.S.X.
0.022e+032Contig8957_atContig8957--1e-41At1g09150pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing proteinC.G.S.X.
0.022e+032Contig1228_s_atContig1228--4e-27At4g00430PIP1C.G.S.X.
0.046e+030HVSMEk0009L02r2_s_atHVSMEk0009L02r2--2e+0At1g63855unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e+032Arabidopsis thalianaAt1g19740838563ATP-dependent protease La (LON) domain-containing proteinF:ATP-dependent peptidase activity;P:ATP-dependent proteolysis;C:chloroplast;OBMPF---C.G.S.X.
0.045e+032Glycine maxHgAffx.17070.1.S1_atCB279286--1e+1At5g35525unknown proteinC.G.S.X.
0.042e+034Oryza sativaOsAffx.9821.1.S1_at---0C.G.S.X.
0.045e+032Populus trichocarpaPtp.6818.1.S1_s_atDN499964hypothetical protein-5e-1At1g68320MYB62 (myb domain protein 62)C.G.S.X.
0.043e+032Triticum aestivumTaAffx.7259.1.S1_atCA663736--2e-1At1g20693HMGB2 (HIGH MOBILITY GROUP B 2)C.G.S.X.
0.044e+030Vitis vinifera1621636_s_atCF202035.1hypothetical protein LOC100265903-8e-4At2g47730ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8)C.G.S.X.
0.036e+030Zea maysZm.9621.1.A1_atBM333959ethylene-responsive transcription factor 3-4e+0At1g69490NAP (NAC-like, activated by AP3/PI)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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