Gene omics information

Query gene ID Contig2481_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7689.8Contig2481_s_atContig2481--8e-6At1g43160RAP2.6 (related to AP2 6)S.X.H.G.
0.3849.5rbaal20n01_s_atrbaal20n01--4e-1At3g46160protein kinase-relatedS.X.H.G.
0.2935.5Contig20072_atContig20072--6e+0At4g26288-S.X.H.G.
0.2326.1Contig656_atContig656--3e-1At4g27230HTA2 (histone H2A)S.X.H.G.
0.2021.1Contig13864_atContig13864--9e-2At3g60590unknown proteinS.X.H.G.
0.2021.1Contig4734_s_atContig4734--1e-25At1g10950endomembrane protein 70, putativeS.X.H.G.
0.1514.1Contig8038_s_atContig8038--7e-82At3g24190ABC1 family proteinS.X.H.G.
0.1412.9Contig17047_atContig17047--2e+0At3g13440methyltransferase/ nucleic acid bindingS.X.H.G.
0.1311.6Contig5497_s_atContig5497--1e-3At3g44190pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
0.1210.4Contig4535_atContig4535--2e-42At4g31490coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
37.299.9GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
36.099.9GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
34.699.9GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
27.799.8GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
27.499.8GSM238427Endosperm 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
24.899.8GSM238422Endosperm 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
24.599.8GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
22.899.8GSM238421Endosperm 0 h; Seed germination Rep 2GSE9365Expression data from barley maturing and germinating grains
15.799.6GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signaling
15.699.6GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-30133Contig6526_atContig6526--7e-1At5g11550bindingC.G.S.X.
0.118e-26117Contig18750_atContig18750--2e+0At2g33710AP2 domain-containing transcription factor family proteinC.G.S.X.
0.105e-24111Contig2471_atContig2471--1e-1At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.091e-1273Contig10472_atContig10472--9e-3At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)C.G.S.X.
0.082e-1169Contig4317_atContig4317--2e-1At1g36060AP2 domain-containing transcription factor, putativeC.G.S.X.
0.042e-1169Contig2479_atContig2479--9e-3At1g53170ERF8C.G.S.X.
0.053e-756Contig8984_atContig8984--2e+0At2g05520GRP-3 (GLYCINE-RICH PROTEIN 3)C.G.S.X.
0.022e-550Contig7483_atContig7483--8e-10At1g68840RAV2 (REGULATOR OF THE ATPASE OF THE VACUOLAR MEMBRANE)C.G.S.X.
0.042e-550Contig17873_atContig17873--4e-1At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.098e-652Arabidopsis thalianaAt1g43160840915RAP2.6 (related to AP2 6)encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.---C.G.S.X.
0.155e-1479Glycine maxGmaAffx.93436.1.A1_s_atCF809161--4e-13At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.235e-89329Oryza sativaOs05g04371009633.m03366-Pathogenesis-related transcriptional factor andERF domain containing protein2e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.044e-240Populus trichocarpaPtp.6257.1.S1_atCV234411hypothetical protein-9e-12At1g53230TCP3C.G.S.X.
0.202e-71270Triticum aestivumTaAffx.16192.1.S1_atBQ169008--1e-8At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.132e-652Vitis vinifera1609683_atCF604955hypothetical protein LOC100249982-2e-11At2g47520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.103e-22105Zea maysZm.18520.1.A1_atCF632042--8e-3At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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