Gene omics information

Query gene ID Contig24654_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1Contig24654_atContig24654--1e-1At1g28460AGL59 (AGAMOUS-LIKE 59)S.X.H.G.
0.1412.9Contig15627_s_atContig15627--4e+0At5g15802unknown proteinS.X.H.G.
0.119.4HU08C09u_atHU08C09u--8e-1At3g30260AGL79 (AGAMOUS-LIKE 79)S.X.H.G.
0.064.8HVSMEb0009N20r2_atHVSMEb0009N20r2--6e+0At3g50960PLP3a (Phosducin-like protein 3 homolog)S.X.H.G.
0.043.4Contig10681_atContig10681--1e-1At3g19480D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putativeS.X.H.G.
0.021.8Contig8230_atContig8230--3e-24At4g04860DER2.2 (DERLIN-2.2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
13.499.4GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
8.198.7GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.098.7GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.598.6GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.897.8GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barley
5.297.4GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
5.197.3GSM261070Albina f-17 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.396.4GSM261062Xantha s-46 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.196.2GSM372990genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.895.7GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-240Contig5260_s_atContig5260--0At2g29630THIC (ThiaminC)C.G.S.X.
0.011e-240Contig5260_atContig5260--0At2g29630THIC (ThiaminC)C.G.S.X.
0.035e-238rbasd18c22_atrbasd18c22--1e+0At1g60250zinc finger (B-box type) family proteinC.G.S.X.
0.035e-238rbasd18c22_s_atrbasd18c22--1e+0At1g60250zinc finger (B-box type) family proteinC.G.S.X.
0.022e-136Contig14647_atContig14647--4e-2At3g24506unknown proteinC.G.S.X.
0.028e-134Contig9118_atContig9118--2e+0At5g23680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.028e-134Contig8278_atContig8278--1e-3At3g55260HEXO1 (BETA-HEXOSAMINIDASE 1)C.G.S.X.
0.018e-134Contig4464_atContig4464--1e-27At5g59420ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C)C.G.S.X.
0.038e-134Contig110_atContig110--5e-12At3g09390MT2A (METALLOTHIONEIN 2A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-138Arabidopsis thalianaAt1g28460839745AGL59 (AGAMOUS-LIKE 59)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFO---C.G.S.X.
0.021e-138Glycine maxPsAffx.CL1935Contig1_atPsAffx.CL1935Contig1--2e+0At2g19000-C.G.S.X.
0.178e-44178Oryza sativaOs06g0724500AK068831.1-WD40-like domain containing protein9e-7At4g35140transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.036e-136Populus trichocarpaPtpAffx.54822.1.S1_atDN486852--1e+0At4g32295unknown proteinC.G.S.X.
0.091e-1377Triticum aestivumTaAffx.12160.1.A1_atBJ286243--8e-1At5g04470SIM (SIAMESE)C.G.S.X.
0.032e+032Vitis vinifera1615569_atCB346786hypothetical protein LOC100258690-1e+0At5g35520MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)C.G.S.X.
0.023e+032Zea maysZm.9295.1.A1_atBM269221--2e-1At1g03055unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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